LEfSe with MaAsLin 2

Downstream analysis and statistics MaAsLin
1

can you help me make my LEFSE with MaAsLin 2?
thank you in advance for your help

2

Hi @samia418

Do you have a specific question about one of these two tools? If you are looking for help I would first suggest checking out their respective tutorial pages:

LEfSe: lefse · biobakery/biobakery Wiki · GitHub
MaAsLin2: MaAsLin2 · biobakery/biobakery Wiki · GitHub

Thanks,
Jacob

3

Please take a look at Bioconductor - lefser if you are interested in an R-based LEfSe implementation.

Thanks,
Himel

1 Like
4

thank you for your help