great to see that the new version of metaphlan is out with some cool new features!
is it possible to use it as part of the latest humann2? or does humann2 still depend on metaphlan2?
cheers!
Andrei
Sorry for not catching this earlier! You can now use a new HUMAnN (3.0) with the new MetaPhlAn (3.0). Please see:
https://forum.biobakery.org/t/announcing-humann-3-0-alpha/518/2