Hi Biobakery folks! How can I get the raw files for host transcriptomics data from the HMP2 project? On ibdmdb.org only the counts tables are available.
Thanks!
Hello @Rotem ,
The host transcriptome data is available is the dbGAP with the authorized access as it is level 3 data.
Link here: dbGaP Study
Regards,
Sagun
Thanks Sagun! The link is helpful.