Hi friends!!! (@franzosa @f.asnicar @fbeghini )
I am very new in HUmann2 and I have installed HUMANN2 2.8.1 and done test run with command:
$humann2_test --run-functional-tests-end-to-end
But I ended up with one failure:
FAIL: test_humann2_fastq_biom_output_pathways (functional_tests_biom_humann2.TestFunctionalHumann2EndtoEndBiom)
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Traceback (most recent call last):
File "/home/dc7/anaconda3/envs/h2/lib/python2.7/site-packages/humann2/tests/functional_tests_biom_humann2.py", line 56, in test_humann2_fastq_biom_output_pathways
self.assertEqual(pathways_found,cfg.expected_demo_output_files_biom_pathways)
AssertionError: Items in the first set but not the second:
u'PWY-5423'
Can you tell me what’s wrong?
Thanks and Regards,
DC7