The bioBakery help forum

About the Maaslin2 category

Name: MaAsLin2
User manual || Tutorial

Description: MaAsLin2 is comprehensive R package for efficiently determining multivariable association between clinical metadata and microbial meta’omic features. MaAsLin2 relies on general linear models to accommodate most modern epidemiological study designs, including cross-sectional and longitudinal, and offers a variety of data exploration, normalization, and transformation methods.


Mallick H, Tickle TL, McIver LJ, Rahnavard G, Nguyen LH, Weingart G, Ma S, Ren B, Schwager E, Subramanian A, Paulson JN, Franzosa EA, Corrada Bravo H, Huttenhower C. “Multivariable Association in Population-scale Meta’omic Surveys”.