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Maaslin3 transformation and normaliazion fix
|
|
3
|
186
|
November 17, 2025
|
|
Lack of sensitivity of Maaslin3
|
|
6
|
130
|
November 16, 2025
|
|
Single copy gene normalization
|
|
2
|
85
|
November 13, 2025
|
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Total RNA contribution for Metatranscriptomics Analysis with MaAsLin3
|
|
5
|
69
|
November 8, 2025
|
|
Question Regarding the Use of MaAsLin3 for Analyzing Differential Abundance/Prevalence of MetaCyc and GMM Metabolic Pathways
|
|
4
|
121
|
November 4, 2025
|
|
Maaslin3 model runs but produce output with no results
|
|
5
|
112
|
November 4, 2025
|
|
Profiling culture strain
|
|
1
|
14
|
November 4, 2025
|
|
Best normalization/transformation strategy in MaAsLin2 for 16S rRNA (Nanopore) data?
|
|
2
|
86
|
November 4, 2025
|
|
Maaslin3 ggplot2 labels error
|
|
6
|
345
|
November 2, 2025
|
|
Testing 4 levels against a control but the results show only two levels
|
|
2
|
59
|
October 24, 2025
|
|
Maaslin3 is running but is not able to generate any results
|
|
1
|
45
|
October 21, 2025
|
|
Error message in Maaslin3
|
|
2
|
58
|
October 19, 2025
|
|
Question on Paired Design Implementation in MaAsLin3
|
|
2
|
67
|
October 16, 2025
|
|
Maaslin Analysis with Non-clinical data and Small samples
|
|
5
|
126
|
October 7, 2025
|
|
No abundance for several species
|
|
4
|
64
|
September 30, 2025
|
|
Suggested min_prevalence and min_abundances for mataphlan or humann inputs in maaslin
|
|
3
|
110
|
September 5, 2025
|
|
Reploting MaAsLin summary plot for interactions
|
|
1
|
113
|
September 2, 2025
|
|
Dividing an abundance table for multiple Maaslin runs
|
|
8
|
89
|
September 1, 2025
|
|
MaAsLin3 summary plot interpretation
|
|
7
|
388
|
August 28, 2025
|
|
MaAsLin3 setup for multiple small and large random effects
|
|
1
|
188
|
August 22, 2025
|
|
MaAslin3 RAM memory
|
|
1
|
46
|
August 14, 2025
|
|
Maaslin3: Low Diversity and Biomass
|
|
1
|
50
|
August 8, 2025
|
|
Downstream meta-analysis from IBD Plexus metagenomics data
|
|
2
|
38
|
August 7, 2025
|
|
Loss of feature with Maaslin3
|
|
1
|
61
|
August 2, 2025
|
|
Maaslin2 "coef" interpretation
|
|
2
|
171
|
July 23, 2025
|
|
Understanding Fixed Effects in Maaslin3 Microbiome Analysis
|
|
1
|
144
|
July 18, 2025
|
|
Random effect participant ID - categorical
|
|
2
|
68
|
July 16, 2025
|
|
Zero filtering of custom Log Ratio data for MaAsLin3
|
|
4
|
65
|
July 10, 2025
|
|
All associations had errors or were insignificant
|
|
11
|
174
|
July 9, 2025
|
|
Trying to understand coef column (and how to convert it to fold change)
|
|
17
|
4102
|
June 19, 2025
|