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Blanks/Negative Controls/Positive Controls in Maaslin
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2
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27
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February 15, 2026
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Maaslin3 summary plot only showing 1 variable heatmap
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1
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115
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February 11, 2026
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Maaslin2 error reporting in RStudio
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4
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63
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February 5, 2026
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Interpretation of interaction terms
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4
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246
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February 5, 2026
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Q-values on produced graphs and 'significant_results.tsv' not lining up
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3
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54
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February 3, 2026
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Can pval be used to compare microbial differences between the two groups only?
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2
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34
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January 30, 2026
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Pval_joint varies with number of features
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7
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54
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January 29, 2026
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Where can I find the relative abundance result file after correcting the covariates with MaAslin2 analysis
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6
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58
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January 29, 2026
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Input Taxonomy and Metadata unavailable on galaxy
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3
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30
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January 28, 2026
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Cannot generate summary plot
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3
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63
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January 23, 2026
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MaAslin2 examples failure
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1
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22
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January 23, 2026
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Question about 'baselines' for effects Maaslin3
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8
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95
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January 23, 2026
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Time-series data (Longitudinal) analysis in MaAslin3
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1
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95
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January 22, 2026
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Inquiry regarding FDR adjustment with covariates
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1
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63
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January 9, 2026
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Super basic query about taxa file for Maaslin3
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6
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70
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December 23, 2025
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Comparing a Single Sample to Multiple Samples Using MaAsLin
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1
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47
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December 18, 2025
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MaAsLin 3: Forcing X-axis variable for Interaction Plots (Diagnosis * Time)
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1
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65
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December 17, 2025
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Error: <ggplot2::labels> object is invalid:
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1
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162
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December 16, 2025
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I want to assign the variables I want for my heatmap
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7
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153
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November 29, 2025
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Pairwise comparisons with multi-level categorical variable in MaAsLin3
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5
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197
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November 18, 2025
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Maaslin3 transformation and normaliazion fix
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3
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242
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November 17, 2025
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Lack of sensitivity of Maaslin3
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6
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156
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November 16, 2025
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Single copy gene normalization
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2
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111
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November 13, 2025
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Total RNA contribution for Metatranscriptomics Analysis with MaAsLin3
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5
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93
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November 8, 2025
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Question Regarding the Use of MaAsLin3 for Analyzing Differential Abundance/Prevalence of MetaCyc and GMM Metabolic Pathways
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4
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195
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November 4, 2025
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Profiling culture strain
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1
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17
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November 4, 2025
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Best normalization/transformation strategy in MaAsLin2 for 16S rRNA (Nanopore) data?
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2
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118
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November 4, 2025
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Maaslin3 ggplot2 labels error
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6
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470
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November 2, 2025
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Testing 4 levels against a control but the results show only two levels
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2
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74
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October 24, 2025
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Maaslin3 is running but is not able to generate any results
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1
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61
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October 21, 2025
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