Why I got more reads after the quality control of KneadData?

thad May 15, 2020, 5:26pm 2

I think my recent post may be relevant. [Kneaddata FASTQ header problem]

Topic		Replies	Views
Lost majority of the reads after kneadata KneadData	1	714	May 24, 2023
Bowtie2 removed the entire reads from my fecal metagenomic data KneadData	2	68	August 10, 2024
There are less reads survived after kneaddata KneadData	5	1112	January 23, 2023
No reads in the "Final output files created" KneadData	2	968	April 14, 2022
Kneaddata not decontaminating fully KneadData	0	535	January 8, 2021