We are officially sunsetting PPANINI.
PPANINI has been a valuable tool for protein family annotation and pan-genome analysis, but it has now been replaced by MetaWIBELE, a more comprehensive and actively maintained workflow for metagenomic and metaproteomic protein discovery and prioritization.
What this means
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PPANINI will no longer be maintained or updated.
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Please transition to MetaWIBELE for all new analyses.
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MetaWIBELE integrates seamlessly with other bioBakery tools and offers improved scalability, annotation depth, and reproducibility.
For installation instructions and documentation, visit the MetaWIBELE GitHub page.
Questions or migration issues can be shared under the MetaWIBELE category here on the forum.
— bioBakery / Huttenhower Lab team