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Metaphlan Read count output instead of relative abundances

Microbial community profiling MetaPhlAn

fbeghini July 22, 2020, 8:13am 2

See Metaphlan3 relative abundance

Topic		Replies	Views	Activity
Metaphlan3 relative abundance MetaPhlAn	14	7356	June 9, 2025
To get the absolute counts of each taxa MetaPhlAn	3	2845	May 18, 2021
Discrepancy between estimated_number_of_reads_from_the_clade and the relative_abundance MetaPhlAn	0	17	January 20, 2026
Relative abundance multiply total sequence counts equals read counts? MetaPhlAn	2	842	August 25, 2022
Relative clade abundance with low number of reads MetaPhlAn	1	449	April 4, 2022