The bioBakery help forum

Metaphlan Read count output instead of relative abundances

Microbial community profiling MetaPhlAn

fbeghini July 22, 2020, 8:13am 2

See Metaphlan3 relative abundance

Topic		Replies	Views	Activity
Metaphlan3 relative abundance MetaPhlAn	13	6074	July 31, 2023
To get the absolute counts of each taxa MetaPhlAn	3	2355	May 18, 2021
Metaphlan4 discordance between relative_abundance and estimated_number_of_reads MetaPhlAn	6	582	October 26, 2022
Relative clade abundance with low number of reads MetaPhlAn	1	371	April 4, 2022
Calculating Alpha and Beta Diversity with Metaphlan3 Rel Abund MetaPhlAn	1	1782	May 27, 2022