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Metaphlan Read count output instead of relative abundances

Microbial community profiling MetaPhlAn

fbeghini July 22, 2020, 8:13am 2

See Metaphlan3 relative abundance

Topic		Replies	Views	Activity
Metaphlan3 relative abundance MetaPhlAn	14	7012	June 9, 2025
To get the absolute counts of each taxa MetaPhlAn	3	2740	May 18, 2021
Metaphlan4 discordance between relative_abundance and estimated_number_of_reads MetaPhlAn	6	735	October 26, 2022
Relative clade abundance with low number of reads MetaPhlAn	1	429	April 4, 2022
Calculating Alpha and Beta Diversity with Metaphlan3 Rel Abund MetaPhlAn	1	2166	May 27, 2022