Merge_metaphlan_tables.py with absolute abundance

[timyerg]

Hi all!
In case if someone will need it, here is the modified file that merges absolute abundances instead of relative abundances in metaphlan output (you should run metaphlan with ‘-t rel_ab_w_read_stats’ option).
merge_metaphlan_tables_abs.txt (3.6 KB)
Rename it as merge_metaphlan_tables_abs.py and make it executable. Usage is the same as for relative abundance merging.

[hpremathilake]

Thank you very much. I needed this!

[hah0024]

@timyerg

merge_metaphlan_tables_abs.py

This worked perfectly, thank you!

[MalbertR]

Thank you very much for this, Tim!