I am new to using LEfSe.
I was following the tutorials and old forums to use LEfSE and to resolve the errors.
Though, I have got stuck at the second step and getting the following output while calculating LDA Effect size:
Number of significantly discriminative features: 0 ( 0 ) before internal wilcoxon
No features with significant differences between the two classes
Number of discriminative features with abs LDA score > 2.0 : 0
I looked into previous forums where similar issuse was discussed but couldn’t help myself with this.
Attached is the data file I am working with.
feature-table.biom.txt (16.3 KB)
Could anyone please help me in getting through this step? Your help will be greatly appreciated. Thanks