Humann_barplot: sample label

Microbial community profiling HUMAnN
1

Hi Biobakery staff,

I have 10 groups of samples and when used humann_barplot to the genefamilies output file, only 7 groups were labelled. The remaining 3 groups were marked as other (as shown below). Is there a way to label all the groups individually?

Thank you!

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2

This is controlled by the --max-metalevels flag. If you set that to 10 it should assign a color to each group with no “other” category.

1 Like
3

Thank you very much for your kind help.