Hello, I am just wondering how many stool samples from IBDMDB have 16S data available? I have downloaded the metadata file and have thus far only been able to locate the raw files for a subset of the samples (58 samples in the HMP2 pilot). According to the metadata however, there were 178 samples for the stool 16S. Greatly appreciate your help on this!
Hello @csie ,
Thank you for reaching out to the bioBakery lab. Please refer to the link below for 178 samples for 16S data.
https://ibdmdb.org/tunnel/public/HMP2/16S/1806/rawfiles
Regards,
Sagun