#mpa_vJan21_CHOCOPhlAnSGB_202103				
#/ext3/miniconda3/bin/metaphlan 				
#2901639 reads processed				
#SampleID	Metaphlan_Analysis			
#estimated_reads_mapped_to_known_clades:2473489				
#clade_name	clade_taxid	relative_abundance	coverage	estimated_number_of_reads_from_the_clade
k__Bacteria	2	100	1.17718	2473489
k__Bacteria|p__Firmicutes	2|1239	99.58274	1.17226	2448960
k__Bacteria|p__Proteobacteria	2|1224	0.36472	0.00429	21758
k__Bacteria|p__Bacteroidetes	2|976	0.05253	0.00062	2771
k__Bacteria|p__Firmicutes|c__Bacilli	2|1239|91061	99.53548	1.17171	2447555
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria	2|1224|1236	0.36472	0.00429	21758
k__Bacteria|p__Bacteroidetes|c__Bacteroidia	2|976|200643	0.05253	0.00062	2771
k__Bacteria|p__Firmicutes|c__Erysipelotrichia	2|1239|526524	0.04727	0.00056	1405
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales	2|1239|91061|186826	99.46957	1.17093	2445351
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales	2|1224|1236|91347	0.36472	0.00429	21758
k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales	2|1239|91061|1385	0.06591	0.00078	2204
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales	2|976|200643|171549	0.05253	0.00062	2771
k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales	2|1239|526524|526525	0.04727	0.00056	1405
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae	2|1239|91061|186826|1300	56.45093	0.66453	1295469
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae	2|1239|91061|186826|33958	42.72935	0.503	1139606
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae	2|1224|1236|91347|543	0.36472	0.00429	21758
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae	2|1239|91061|186826|81852	0.28928	0.00341	10276
k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae	2|1239|91061|1385|90964	0.06591	0.00078	2204
k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae	2|1239|526524|526525|128827	0.04727	0.00056	1405
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_unclassified	2|976|200643|171549|	0.04055	0.00048	2352
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Muribaculaceae	2|976|200643|171549|2005473	0.01199	0.00014	419
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus	2|1239|91061|186826|1300|1301	56.45093	0.66453	1295469
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Ligilactobacillus	2|1239|91061|186826|33958|2767887	42.70153	0.50267	1138934
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia	2|1224|1236|91347|543|561	0.36472	0.00429	21758
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus	2|1239|91061|186826|81852|1350	0.28928	0.00341	10276
k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus	2|1239|91061|1385|90964|1279	0.06591	0.00078	2204
k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Faecalibaculum	2|1239|526524|526525|128827|1729679	0.04727	0.00056	1405
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_unclassified|g__Bacteroidales_unclassified	2|976|200643|171549||	0.04055	0.00048	2352
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus	2|1239|91061|186826|33958|1578	0.02783	0.00033	672
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Muribaculaceae|g__GGB14016	2|976|200643|171549|2005473|	0.01199	0.00014	419
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_danieliae	2|1239|91061|186826|1300|1301|747656	56.0384	0.65967	1283756
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Ligilactobacillus|s__Ligilactobacillus_murinus	2|1239|91061|186826|33958|2767887|1622	42.70153	0.50267	1138934
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_thoraltensis	2|1239|91061|186826|1300|1301|55085	0.41254	0.00486	11713
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_coli	2|1224|1236|91347|543|561|562	0.36472	0.00429	21758
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecalis	2|1239|91061|186826|81852|1350|1351	0.28928	0.00341	10276
k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_xylosus	2|1239|91061|1385|90964|1279|1288	0.06591	0.00078	2204
k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Faecalibaculum|s__Faecalibaculum_rodentium	2|1239|526524|526525|128827|1729679|1702221	0.04727	0.00056	1405
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_unclassified|g__Bacteroidales_unclassified|s__Bacteroidales_bacterium	2|976|200643|171549|||2030927	0.04055	0.00048	2352
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_intestinalis	2|1239|91061|186826|33958|1578|151781	0.02687	0.00032	651
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Muribaculaceae|g__GGB14016|s__GGB14016_SGB21443	2|976|200643|171549|2005473||	0.01199	0.00014	419
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_johnsonii	2|1239|91061|186826|33958|1578|33959	0.00096	1.00E-05	21
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_danieliae|t__SGB82603	2|1239|91061|186826|1300|1301|747656|	56.0384	0.65967	1283756
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Ligilactobacillus|s__Ligilactobacillus_murinus|t__SGB7077	2|1239|91061|186826|33958|2767887|1622|	42.70153	0.50267	1138934
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_thoraltensis|t__SGB29808	2|1239|91061|186826|1300|1301|55085|	0.41254	0.00486	11713
k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacterales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_coli|t__SGB10068	2|1224|1236|91347|543|561|562|	0.36472	0.00429	21758
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecalis|t__SGB7962	2|1239|91061|186826|81852|1350|1351|	0.28928	0.00341	10276
k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_xylosus|t__SGB7847_group	2|1239|91061|1385|90964|1279|1288|	0.06591	0.00078	2204
k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Faecalibaculum|s__Faecalibaculum_rodentium|t__SGB4047	2|1239|526524|526525|128827|1729679|1702221|	0.04727	0.00056	1405
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_unclassified|g__Bacteroidales_unclassified|s__Bacteroidales_bacterium|t__SGB27761	2|976|200643|171549|||2030927|	0.04055	0.00048	2352
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_intestinalis|t__SGB7055	2|1239|91061|186826|33958|1578|151781|	0.02687	0.00032	651
k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Muribaculaceae|g__GGB14016|s__GGB14016_SGB21443|t__SGB21443	2|976|200643|171549|2005473|||	0.01199	0.00014	419
k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_johnsonii|t__SGB7041	2|1239|91061|186826|33958|1578|33959|	0.00096	1.00E-05	21