09/14/2020 12:50:00 PM - humann.humann - INFO: Running humann v3.0.0.alpha.4 09/14/2020 12:50:00 PM - humann.humann - INFO: Output files will be written to: /home/stefanie.prast/projects/ep/humann3/PA.02humann3 09/14/2020 12:50:00 PM - humann.humann - INFO: Writing temp files to directory: /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp 09/14/2020 12:50:00 PM - humann.utilities - INFO: File ( /home/stefanie.prast/projects/ep/SUPERFOCUS/PA.02.fastq ) is of format: fastq 09/14/2020 12:50:00 PM - humann.humann - INFO: Removing spaces from identifiers in input file 09/14/2020 12:50:18 PM - humann.utilities - DEBUG: Check software, metaphlan, for required version, 3.0 09/14/2020 12:50:19 PM - humann.utilities - INFO: Using metaphlan version 3.0 09/14/2020 12:50:19 PM - humann.utilities - DEBUG: Check software, bowtie2, for required version, 2.2 09/14/2020 12:50:19 PM - humann.utilities - INFO: Using bowtie2 version 2.3 09/14/2020 12:50:19 PM - humann.humann - INFO: Search mode set to uniref90 because a uniref90 translated search database is selected 09/14/2020 12:50:19 PM - humann.utilities - DEBUG: Check software, diamond, for required version, 0.9.24 09/14/2020 12:50:19 PM - humann.utilities - INFO: Using diamond version 0.9.24 09/14/2020 12:50:19 PM - humann.config - INFO: Run config settings: DATABASE SETTINGS nucleotide database folder = /home/stefanie.prast/humann3/chocophlan_db/chocophlan protein database folder = /home/stefanie.prast/humann3/uniref90_diamond_db/uniref pathways database file 1 = /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/data/pathways/metacyc_reactions_level4ec_only.uniref.bz2 pathways database file 2 = /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/data/pathways/metacyc_pathways_structured_filtered utility mapping database folder = /home/stefanie.prast/humann3/utility_db/utility_mapping RUN MODES resume = False verbose = False bypass prescreen = False bypass nucleotide index = False bypass nucleotide search = False bypass translated search = False translated search = diamond pick frames = off threads = 20 SEARCH MODE search mode = uniref90 nucleotide identity threshold = 0.0 translated identity threshold = 80.0 ALIGNMENT SETTINGS bowtie2 options = --very-sensitive diamond options = --top 1 --outfmt 6 evalue threshold = 1.0 prescreen threshold = 0.01 translated subject coverage threshold = 50.0 translated query coverage threshold = 90.0 nucleotide subject coverage threshold = 50.0 nucleotide query coverage threshold = 90.0 PATHWAYS SETTINGS minpath = on xipe = off gap fill = on INPUT AND OUTPUT FORMATS input file format = fastq output file format = tsv output max decimals = 10 remove stratified output = False remove column description output = False log level = DEBUG 09/14/2020 12:50:19 PM - humann.store - DEBUG: Initialize Alignments class instance to minimize memory use 09/14/2020 12:50:19 PM - humann.store - DEBUG: Initialize Reads class instance to minimize memory use 09/14/2020 12:50:35 PM - humann.humann - INFO: Load pathways database part 1: /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/data/pathways/metacyc_reactions_level4ec_only.uniref.bz2 09/14/2020 12:50:36 PM - humann.humann - INFO: Load pathways database part 2: /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/data/pathways/metacyc_pathways_structured_filtered 09/14/2020 12:50:36 PM - humann.search.prescreen - INFO: Running metaphlan ........ 09/14/2020 12:50:36 PM - humann.utilities - DEBUG: Using software: /home/stefanie.prast/.local/bin/metaphlan 09/14/2020 12:50:36 PM - humann.utilities - INFO: Execute command: /home/stefanie.prast/.local/bin/metaphlan /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptq04i0gr -t rel_ab -o /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_metaphlan_bugs_list.tsv --input_type fastq --bowtie2out /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_metaphlan_bowtie2.txt --nproc 20 09/14/2020 12:53:15 PM - humann.utilities - DEBUG: b'WARNING: The metagenome profile contains clades that represent multiple species merged into a single representant.\nAn additional column listing the merged species is added to the MetaPhlAn output.\n' 09/14/2020 12:53:15 PM - humann.humann - INFO: TIMESTAMP: Completed prescreen : 159 seconds 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_caccae : 19.64% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_fragilis : 14.87% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Eggerthella.s__Eggerthella_lenta : 6.77% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_vulgatus : 5.45% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bifidobacterium.s__Bifidobacterium_longum : 5.22% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Collinsella.s__Collinsella_aerofaciens : 4.89% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Alistipes.s__Alistipes_putredinis : 3.84% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_uniformis : 3.77% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans : 3.44% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum : 3.23% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Parabacteroides.s__Parabacteroides_distasonis : 3.16% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Erysipelatoclostridium.s__Clostridium_innocuum : 2.75% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Faecalibacterium.s__Faecalibacterium_prausnitzii : 2.63% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bifidobacterium.s__Bifidobacterium_bifidum : 2.32% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Blautia.s__Ruminococcus_gnavus : 2.10% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Escherichia.s__Escherichia_coli : 2.01% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Eubacterium.s__Eubacterium_hallii : 1.78% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Streptococcus.s__Streptococcus_thermophilus : 1.62% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Flavonifractor.s__Flavonifractor_plautii : 1.53% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Blautia.s__Blautia_wexlerae : 1.31% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_cellulosilyticus : 0.94% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Alistipes.s__Alistipes_finegoldii : 0.93% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Lachnospiraceae_unclassified.s__Eubacterium_rectale : 0.75% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_thetaiotaomicron : 0.71% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Bacteroides.s__Bacteroides_ovatus : 0.69% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Anaerotruncus.s__Anaerotruncus_colihominis : 0.64% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Megasphaera.s__Megasphaera_sp_BV3C16_1 : 0.52% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Sellimonas.s__Sellimonas_intestinalis : 0.46% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Clostridium.s__Clostridium_sp_MSTE9 : 0.35% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Anaerostipes.s__Anaerostipes_hadrus : 0.31% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Lachnoclostridium.s__Clostridium_symbiosum : 0.25% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Roseburia.s__Roseburia_inulinivorans : 0.24% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Gordonibacter.s__Gordonibacter_pamelaeae : 0.18% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Roseburia.s__Roseburia_hominis : 0.18% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Hungatella.s__Hungatella_hathewayi : 0.13% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Robinsoniella.s__Robinsoniella_sp_RHS : 0.07% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum : 0.07% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Lachnoclostridium.s__Clostridium_scindens : 0.06% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Gemmiger.s__Gemmiger_formicilis : 0.06% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Eisenbergiella.s__Eisenbergiella_tayi : 0.05% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Blautia.s__Blautia_sp_CAG_257 : 0.04% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Found g__Selenomonas.s__Selenomonas_noxia : 0.03% of mapped reads 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Total species selected from prescreen: 42 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Alistipes.s__Alistipes_finegoldii.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Alistipes.s__Alistipes_putredinis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Alistipes.s__Alistipes_putredinis_CAG_67.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Anaerostipes.s__Anaerostipes_hadrus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Anaerotruncus.s__Anaerotruncus_colihominis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_caccae.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_cellulosilyticus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_fragilis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_fragilis_CAG_47.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_ovatus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_uniformis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_uniformis_CAG_3.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_vulgatus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bacteroides.s__Bacteroides_vulgatus_CAG_6.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bifidobacterium.s__Bifidobacterium_bifidum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bifidobacterium.s__Bifidobacterium_longum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Blautia.s__Blautia_sp_CAG_257.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Blautia.s__Blautia_wexlerae.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Blautia.s__Ruminococcus_gnavus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Clostridium.s__Clostridium_sp_MSTE9.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Eggerthella.s__Eggerthella_lenta.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Eisenbergiella.s__Eisenbergiella_tayi.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Erysipelatoclostridium.s__Clostridium_innocuum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Escherichia.s__Escherichia_coli.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Eubacterium.s__Eubacterium_hallii.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Eubacterium.s__Eubacterium_hallii_CAG_12.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Faecalibacterium.s__Faecalibacterium_prausnitzii.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Flavonifractor.s__Flavonifractor_plautii.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Gemmiger.s__Gemmiger_formicilis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Hungatella.s__Hungatella_hathewayi.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Lachnoclostridium.s__Clostridium_scindens.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Lachnoclostridium.s__Clostridium_symbiosum.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Lachnospiraceae_unclassified.s__Eubacterium_rectale.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Megasphaera.s__Megasphaera_sp_BV3C16_1.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Parabacteroides.s__Parabacteroides_distasonis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Robinsoniella.s__Robinsoniella_sp_RHS.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Roseburia.s__Roseburia_hominis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Roseburia.s__Roseburia_inulinivorans.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Roseburia.s__Roseburia_inulinivorans_CAG_15.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Selenomonas.s__Selenomonas_noxia.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Sellimonas.s__Sellimonas_intestinalis.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Streptococcus.s__Streptococcus_thermophilus.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - DEBUG: Adding file to database: g__Streptococcus.s__Streptococcus_thermophilus_CAG_236.centroids.v296_201901.ffn.gz 09/14/2020 12:53:15 PM - humann.search.prescreen - INFO: Creating custom ChocoPhlAn database ........ 09/14/2020 12:53:15 PM - humann.utilities - DEBUG: Using software: /usr/bin/gunzip 09/14/2020 12:53:15 PM - humann.utilities - INFO: Execute command: /usr/bin/gunzip -c /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Alistipes.s__Alistipes_finegoldii.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Alistipes.s__Alistipes_putredinis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Alistipes.s__Alistipes_putredinis_CAG_67.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Anaerostipes.s__Anaerostipes_hadrus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Anaerotruncus.s__Anaerotruncus_colihominis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_caccae.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_cellulosilyticus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_fragilis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_fragilis_CAG_47.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_ovatus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_thetaiotaomicron.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_uniformis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_uniformis_CAG_3.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_vulgatus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bacteroides.s__Bacteroides_vulgatus_CAG_6.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bifidobacterium.s__Bifidobacterium_bifidum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bifidobacterium.s__Bifidobacterium_longum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Blautia.s__Blautia_sp_CAG_257.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Blautia.s__Blautia_wexlerae.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Blautia.s__Ruminococcus_gnavus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Clostridium.s__Clostridium_sp_MSTE9.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Eggerthella.s__Eggerthella_lenta.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Eisenbergiella.s__Eisenbergiella_tayi.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Erysipelatoclostridium.s__Clostridium_innocuum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Escherichia.s__Escherichia_coli.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Eubacterium.s__Eubacterium_hallii.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Eubacterium.s__Eubacterium_hallii_CAG_12.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Faecalibacterium.s__Faecalibacterium_prausnitzii.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Flavonifractor.s__Flavonifractor_plautii.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Gemmiger.s__Gemmiger_formicilis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Hungatella.s__Hungatella_hathewayi.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Lachnoclostridium.s__Clostridium_scindens.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Lachnoclostridium.s__Clostridium_symbiosum.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Lachnospiraceae_unclassified.s__Eubacterium_rectale.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Megasphaera.s__Megasphaera_sp_BV3C16_1.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Parabacteroides.s__Parabacteroides_distasonis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Robinsoniella.s__Robinsoniella_sp_RHS.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Roseburia.s__Roseburia_hominis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Roseburia.s__Roseburia_inulinivorans.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Roseburia.s__Roseburia_inulinivorans_CAG_15.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Selenomonas.s__Selenomonas_noxia.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Sellimonas.s__Sellimonas_intestinalis.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Streptococcus.s__Streptococcus_thermophilus.centroids.v296_201901.ffn.gz /home/stefanie.prast/humann3/chocophlan_db/chocophlan/g__Streptococcus.s__Streptococcus_thermophilus_CAG_236.centroids.v296_201901.ffn.gz 09/14/2020 12:53:20 PM - humann.humann - INFO: TIMESTAMP: Completed custom database creation : 5 seconds 09/14/2020 12:53:20 PM - humann.search.nucleotide - INFO: Running bowtie2-build ........ 09/14/2020 12:53:20 PM - humann.utilities - DEBUG: Using software: /ctmr/anaconda/anaconda3/bin/bowtie2-build 09/14/2020 12:53:20 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/bowtie2-build -f /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_custom_chocophlan_database.ffn /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_bowtie2_index 09/14/2020 01:00:54 PM - humann.humann - INFO: TIMESTAMP: Completed database index : 454 seconds 09/14/2020 01:00:54 PM - humann.search.nucleotide - DEBUG: Nucleotide input file is of type: fastq 09/14/2020 01:00:54 PM - humann.utilities - DEBUG: Using software: /ctmr/anaconda/anaconda3/bin/bowtie2 09/14/2020 01:00:54 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/bowtie2 -q -x /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_bowtie2_index -U /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptq04i0gr -S /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_bowtie2_aligned.sam -p 20 --very-sensitive 09/14/2020 01:03:26 PM - humann.utilities - DEBUG: b'5320532 reads; of these:\n 5320532 (100.00%) were unpaired; of these:\n 3626923 (68.17%) aligned 0 times\n 890014 (16.73%) aligned exactly 1 time\n 803595 (15.10%) aligned >1 times\n31.83% overall alignment rate\n' 09/14/2020 01:03:26 PM - humann.humann - INFO: TIMESTAMP: Completed nucleotide alignment : 152 seconds 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments where percent identity is not a number: 0 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments where alignment length is not a number: 0 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments where E-value is not a number: 0 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments not included based on large e-value: 0 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments not included based on small percent identity: 0 09/14/2020 01:05:57 PM - humann.utilities - DEBUG: Total alignments not included based on small query coverage: 0 09/14/2020 01:05:57 PM - humann.search.blastx_coverage - INFO: Total alignments without coverage information: 0 09/14/2020 01:05:57 PM - humann.search.blastx_coverage - INFO: Total proteins in blastx output: 121666 09/14/2020 01:05:57 PM - humann.search.blastx_coverage - INFO: Total proteins without lengths: 0 09/14/2020 01:05:57 PM - humann.search.blastx_coverage - INFO: Proteins with coverage greater than threshold (50.0): 90871 09/14/2020 01:08:20 PM - humann.search.nucleotide - DEBUG: Total nucleotide alignments not included based on filtered genes: 83761 09/14/2020 01:08:20 PM - humann.search.nucleotide - DEBUG: Total nucleotide alignments not included based on small percent identities: 71199 09/14/2020 01:08:20 PM - humann.search.nucleotide - DEBUG: Total nucleotide alignments not included based on query coverage threshold: 0 09/14/2020 01:08:20 PM - humann.search.nucleotide - DEBUG: Keeping sam file 09/14/2020 01:08:21 PM - humann.humann - INFO: TIMESTAMP: Completed nucleotide alignment post-processing : 295 seconds 09/14/2020 01:08:21 PM - humann.humann - INFO: Total bugs from nucleotide alignment: 49 09/14/2020 01:08:21 PM - humann.humann - INFO: g__Bacteroides.s__Bacteroides_caccae: 274330 hits g__Bacteroides.s__Bacteroides_uniformis: 49963 hits g__Bacteroides.s__Bacteroides_thetaiotaomicron: 21241 hits g__Escherichia.s__Escherichia_coli: 68316 hits g__Bacteroides.s__Bacteroides_cellulosilyticus: 127837 hits g__Bacteroides.s__Bacteroides_fragilis_CAG_47: 53444 hits g__Flavonifractor.s__Flavonifractor_plautii: 19952 hits g__Eisenbergiella.s__Eisenbergiella_tayi: 22801 hits g__Bacteroides.s__Bacteroides_fragilis: 129600 hits g__Roseburia.s__Roseburia_inulinivorans: 7677 hits g__Blautia.s__Ruminococcus_gnavus: 25090 hits g__Erysipelatoclostridium.s__Clostridium_innocuum: 36624 hits g__Bacteroides.s__Bacteroides_vulgatus_CAG_6: 39241 hits g__Bacteroides.s__Bacteroides_uniformis_CAG_3: 24794 hits g__Parabacteroides.s__Parabacteroides_distasonis: 54353 hits g__Faecalibacterium.s__Faecalibacterium_prausnitzii: 62395 hits g__Blautia.s__Blautia_wexlerae: 22922 hits g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234: 5157 hits g__Streptococcus.s__Streptococcus_thermophilus: 6025 hits g__Streptococcus.s__Streptococcus_thermophilus_CAG_236: 2733 hits g__Eubacterium.s__Eubacterium_hallii: 11415 hits g__Bifidobacterium.s__Bifidobacterium_longum: 24012 hits g__Bacteroides.s__Bacteroides_vulgatus: 97178 hits g__Bacteroides.s__Bacteroides_ovatus: 68203 hits g__Eggerthella.s__Eggerthella_lenta: 61835 hits g__Eubacterium.s__Eubacterium_hallii_CAG_12: 7545 hits g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69: 13343 hits g__Alistipes.s__Alistipes_putredinis_CAG_67: 21486 hits g__Lachnoclostridium.s__Clostridium_symbiosum: 3016 hits g__Hungatella.s__Hungatella_hathewayi: 5757 hits g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum: 23221 hits g__Anaerostipes.s__Anaerostipes_hadrus: 3931 hits g__Alistipes.s__Alistipes_finegoldii: 19693 hits g__Gemmiger.s__Gemmiger_formicilis: 12487 hits g__Blautia.s__Blautia_sp_CAG_257: 865 hits g__Sellimonas.s__Sellimonas_intestinalis: 9649 hits g__Lachnoclostridium.s__Clostridium_scindens: 9455 hits g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans: 30308 hits g__Alistipes.s__Alistipes_putredinis: 14038 hits g__Lachnospiraceae_unclassified.s__Eubacterium_rectale: 11599 hits g__Bifidobacterium.s__Bifidobacterium_bifidum: 10010 hits g__Clostridium.s__Clostridium_sp_MSTE9: 10282 hits g__Selenomonas.s__Selenomonas_noxia: 269 hits g__Roseburia.s__Roseburia_hominis: 3059 hits g__Anaerotruncus.s__Anaerotruncus_colihominis: 6393 hits g__Megasphaera.s__Megasphaera_sp_BV3C16_1: 5965 hits g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum: 902 hits g__Roseburia.s__Roseburia_inulinivorans_CAG_15: 669 hits g__Robinsoniella.s__Robinsoniella_sp_RHS: 1383 hits 09/14/2020 01:08:21 PM - humann.humann - INFO: Total gene families from nucleotide alignment: 90300 09/14/2020 01:08:21 PM - humann.humann - INFO: Unaligned reads after nucleotide alignment: 71.0092336631 % 09/14/2020 01:08:21 PM - humann.search.translated - INFO: Running diamond ........ 09/14/2020 01:08:21 PM - humann.search.translated - INFO: Aligning to reference database: uniref90_201901.dmnd 09/14/2020 01:08:21 PM - humann.utilities - DEBUG: Remove file: /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/diamond_m8_xbf316mw 09/14/2020 01:08:21 PM - humann.utilities - DEBUG: Using software: /ctmr/anaconda/anaconda3/bin/diamond 09/14/2020 01:08:21 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/diamond blastx --query /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/PA.02_bowtie2_unaligned.fa --evalue 1.0 --threads 20 --top 1 --outfmt 6 --db /home/stefanie.prast/humann3/uniref90_diamond_db/uniref/uniref90_201901 --out /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/diamond_m8_xbf316mw --tmpdir /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj 09/14/2020 02:52:14 PM - humann.utilities - DEBUG: b'diamond v0.9.24.125 | by Benjamin Buchfink \nLicensed under the GNU GPL \nCheck http://github.com/bbuchfink/diamond for updates.\n\n#CPU threads: 20\nScoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)\nTemporary directory: /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj\nOpening the database... [4.9e-05s]\nPercentage range of top alignment score to report hits: 1\nOpening the input file... [2.4e-05s]\nOpening the output file... [4.3e-05s]\nLoading query sequences... [14.5449s]\nMasking queries... [33.3956s]\nBuilding query seed set... [0.133144s]\nAlgorithm: Double-indexed\nBuilding query histograms... [2.03219s]\nAllocating buffers... [0.000195s]\nLoading reference sequences... [4.07724s]\nBuilding reference histograms... [2.76598s]\nAllocating buffers... [9.3e-05s]\nInitializing temporary storage... [0.314333s]\nProcessing query chunk 0, reference chunk 0, shape 0, index chunk 0.\nBuilding reference index... [5.56216s]\nBuilding query index... [2.44912s]\nBuilding seed filter... [0.452125s]\nSearching alignments... [24.0607s]\nProcessing query chunk 0, reference chunk 0, shape 0, index chunk 1.\nBuilding reference index... [5.34292s]\nBuilding query index... [2.81876s]\nBuilding seed filter... [0.575117s]\nSearching alignments... [24.0056s]\nProcessing query chunk 0, reference chunk 0, shape 0, index chunk 2.\nBuilding reference index... [5.46439s]\nBuilding query index... [2.83451s]\nBuilding seed filter... [0.636855s]\nSearching alignments... [23.2001s]\nProcessing query chunk 0, reference chunk 0, shape 0, index chunk 3.\nBuilding reference index... [4.82255s]\nBuilding query index... [2.73124s]\nBuilding seed filter... [0.525542s]\nSearching alignments... [23.1012s]\nProcessing query chunk 0, reference chunk 0, shape 1, index chunk 0.\nBuilding reference index... [4.74782s]\nBuilding query index... [2.49244s]\nBuilding seed filter... [0.504675s]\nSearching alignments... [18.6688s]\nProcessing query chunk 0, reference chunk 0, shape 1, index chunk 1.\nBuilding reference index... [5.27917s]\nBuilding query index... [2.7293s]\nBuilding seed filter... [0.545233s]\nSearching alignments... [18.935s]\nProcessing query chunk 0, reference chunk 0, shape 1, index chunk 2.\nBuilding reference index... [5.41452s]\nBuilding query index... [2.80021s]\nBuilding seed filter... [0.592644s]\nSearching alignments... [18.8687s]\nProcessing query chunk 0, reference chunk 0, shape 1, index chunk 3.\nBuilding reference index... [4.83644s]\nBuilding query index... [2.52479s]\nBuilding seed filter... [0.557966s]\nSearching alignments... [18.8205s]\nDeallocating buffers... [0.498301s]\nOpening temporary output file... [0.001081s]\nComputing alignments... [82.6649s]\nDeallocating reference... [0.346738s]\nLoading reference sequences... [4.12367s]\nBuilding reference histograms... [3.27589s]\nAllocating buffers... [0.000106s]\nInitializing temporary storage... [0.361189s]\nProcessing query chunk 0, reference chunk 1, shape 0, index chunk 0.\nBuilding reference index... [5.1917s]\nBuilding query index... [2.71544s]\nBuilding seed filter... [0.579464s]\nSearching alignments... [24.2309s]\nProcessing query chunk 0, reference chunk 1, shape 0, index chunk 1.\nBuilding reference index... [5.39577s]\nBuilding query index... [2.96979s]\nBuilding seed filter... [0.70662s]\nSearching alignments... [23.5421s]\nProcessing query chunk 0, reference chunk 1, shape 0, index chunk 2.\nBuilding reference index... [5.49758s]\nBuilding query index... [2.82189s]\nBuilding seed filter... [0.542716s]\nSearching alignments... [23.5641s]\nProcessing query chunk 0, reference chunk 1, shape 0, index chunk 3.\nBuilding reference index... [4.822s]\nBuilding query index... [2.56804s]\nBuilding seed filter... [0.504051s]\nSearching alignments... [23.5104s]\nProcessing query chunk 0, reference chunk 1, shape 1, index chunk 0.\nBuilding reference index... [4.71882s]\nBuilding query index... [2.52185s]\nBuilding seed filter... [0.508059s]\nSearching alignments... [19.052s]\nProcessing query chunk 0, reference chunk 1, shape 1, index chunk 1.\nBuilding reference index... [5.30218s]\nBuilding query index... [2.80054s]\nBuilding seed filter... [0.578149s]\nSearching alignments... [18.9617s]\nProcessing query chunk 0, reference chunk 1, shape 1, index chunk 2.\nBuilding reference index... [5.56649s]\nBuilding query index... [2.74816s]\nBuilding seed filter... [0.547521s]\nSearching alignments... [19.029s]\nProcessing query chunk 0, reference chunk 1, shape 1, index chunk 3.\nBuilding reference index... [4.90201s]\nBuilding query index... [2.65794s]\nBuilding seed filter... [0.564485s]\nSearching alignments... [19.2722s]\nDeallocating buffers... [0.481063s]\nOpening temporary output file... [0.00107s]\nComputing alignments... [82.356s]\nDeallocating reference... [0.338076s]\nLoading reference sequences... [4.24818s]\nBuilding reference histograms... [3.0324s]\nAllocating buffers... [0.000126s]\nInitializing temporary storage... [0.022277s]\nProcessing query chunk 0, reference chunk 2, shape 0, index chunk 0.\nBuilding reference index... [5.38883s]\nBuilding query index... [2.56478s]\nBuilding seed filter... [0.510653s]\nSearching alignments... [24.4822s]\nProcessing query chunk 0, reference chunk 2, shape 0, index chunk 1.\nBuilding reference index... [5.39169s]\nBuilding query index... [2.94782s]\nBuilding seed filter... [0.685194s]\nSearching alignments... [23.6201s]\nProcessing query chunk 0, reference chunk 2, shape 0, index chunk 2.\nBuilding reference index... [5.5826s]\nBuilding query index... [2.96973s]\nBuilding seed filter... [0.519496s]\nSearching alignments... [23.2949s]\nProcessing query chunk 0, reference chunk 2, shape 0, index chunk 3.\nBuilding reference index... [4.65612s]\nBuilding query index... [2.62943s]\nBuilding seed filter... [0.467581s]\nSearching alignments... [23.4236s]\nProcessing query chunk 0, reference chunk 2, shape 1, index chunk 0.\nBuilding reference index... [4.75289s]\nBuilding query index... [2.41822s]\nBuilding seed filter... [0.403857s]\nSearching alignments... [18.8794s]\nProcessing query chunk 0, reference chunk 2, shape 1, index chunk 1.\nBuilding reference index... [5.34091s]\nBuilding query index... [2.75563s]\nBuilding seed filter... [0.664555s]\nSearching alignments... [18.692s]\nProcessing query chunk 0, reference chunk 2, shape 1, index chunk 2.\nBuilding reference index... [5.22965s]\nBuilding query index... [2.83593s]\nBuilding seed filter... [0.528565s]\nSearching alignments... [18.643s]\nProcessing query chunk 0, reference chunk 2, shape 1, index chunk 3.\nBuilding reference index... [4.68376s]\nBuilding query index... [2.26247s]\nBuilding seed filter... [0.409654s]\nSearching alignments... [18.7893s]\nDeallocating buffers... [0.452336s]\nOpening temporary output file... [0.000878s]\nComputing alignments... [82.1849s]\nDeallocating reference... [0.353627s]\nLoading reference sequences... [4.10826s]\nBuilding reference histograms... [3.11046s]\nAllocating buffers... [0.000127s]\nInitializing temporary storage... [0.02144s]\nProcessing query chunk 0, reference chunk 3, shape 0, index chunk 0.\nBuilding reference index... [4.56779s]\nBuilding query index... [2.62891s]\nBuilding seed filter... [1.16508s]\nSearching alignments... [24.6246s]\nProcessing query chunk 0, reference chunk 3, shape 0, index chunk 1.\nBuilding reference index... [5.44828s]\nBuilding query index... [2.85489s]\nBuilding seed filter... [0.657738s]\nSearching alignments... [23.4249s]\nProcessing query chunk 0, reference chunk 3, shape 0, index chunk 2.\nBuilding reference index... [5.53165s]\nBuilding query index... [2.99702s]\nBuilding seed filter... [0.686744s]\nSearching alignments... [23.6646s]\nProcessing query chunk 0, reference chunk 3, shape 0, index chunk 3.\nBuilding reference index... [4.77629s]\nBuilding query index... [2.5363s]\nBuilding seed filter... [0.498034s]\nSearching alignments... [23.1146s]\nProcessing query chunk 0, reference chunk 3, shape 1, index chunk 0.\nBuilding reference index... [4.72488s]\nBuilding query index... [2.38944s]\nBuilding seed filter... [0.410339s]\nSearching alignments... [18.7873s]\nProcessing query chunk 0, reference chunk 3, shape 1, index chunk 1.\nBuilding reference index... [5.33236s]\nBuilding query index... [2.79122s]\nBuilding seed filter... [0.522199s]\nSearching alignments... [18.7854s]\nProcessing query chunk 0, reference chunk 3, shape 1, index chunk 2.\nBuilding reference index... [5.35476s]\nBuilding query index... [2.79475s]\nBuilding seed filter... [0.580317s]\nSearching alignments... [18.789s]\nProcessing query chunk 0, reference chunk 3, shape 1, index chunk 3.\nBuilding reference index... [4.6736s]\nBuilding query index... [2.52639s]\nBuilding seed filter... [0.474891s]\nSearching alignments... [18.6415s]\nDeallocating buffers... [0.482834s]\nOpening temporary output file... [0.001058s]\nComputing alignments... [82.3193s]\nDeallocating reference... [0.328311s]\nLoading reference sequences... [4.1626s]\nBuilding reference histograms... [3.0942s]\nAllocating buffers... [5.9e-05s]\nInitializing temporary storage... [0.012207s]\nProcessing query chunk 0, reference chunk 4, shape 0, index chunk 0.\nBuilding reference index... [4.63307s]\nBuilding query index... [2.4767s]\nBuilding seed filter... [0.891665s]\nSearching alignments... [24.3596s]\nProcessing query chunk 0, reference chunk 4, shape 0, index chunk 1.\nBuilding reference index... [5.36613s]\nBuilding query index... [2.84775s]\nBuilding seed filter... [0.606747s]\nSearching alignments... [23.8353s]\nProcessing query chunk 0, reference chunk 4, shape 0, index chunk 2.\nBuilding reference index... [5.39769s]\nBuilding query index... [2.8959s]\nBuilding seed filter... [0.409743s]\nSearching alignments... [23.3667s]\nProcessing query chunk 0, reference chunk 4, shape 0, index chunk 3.\nBuilding reference index... [4.64666s]\nBuilding query index... [2.63704s]\nBuilding seed filter... [0.433433s]\nSearching alignments... [23.3113s]\nProcessing query chunk 0, reference chunk 4, shape 1, index chunk 0.\nBuilding reference index... [4.46847s]\nBuilding query index... [2.4744s]\nBuilding seed filter... [0.563553s]\nSearching alignments... [18.7397s]\nProcessing query chunk 0, reference chunk 4, shape 1, index chunk 1.\nBuilding reference index... [5.27053s]\nBuilding query index... [2.75248s]\nBuilding seed filter... [0.407891s]\nSearching alignments... [19.0176s]\nProcessing query chunk 0, reference chunk 4, shape 1, index chunk 2.\nBuilding reference index... [5.34924s]\nBuilding query index... [2.71206s]\nBuilding seed filter... [0.408935s]\nSearching alignments... [18.5444s]\nProcessing query chunk 0, reference chunk 4, shape 1, index chunk 3.\nBuilding reference index... [4.57257s]\nBuilding query index... [2.4555s]\nBuilding seed filter... [0.469159s]\nSearching alignments... [19.0842s]\nDeallocating buffers... [0.400679s]\nOpening temporary output file... [0.001381s]\nComputing alignments... [83.1907s]\nDeallocating reference... [0.357643s]\nLoading reference sequences... [4.23742s]\nBuilding reference histograms... [3.12909s]\nAllocating buffers... [0.000127s]\nInitializing temporary storage... [0.021188s]\nProcessing query chunk 0, reference chunk 5, shape 0, index chunk 0.\nBuilding reference index... [5.10205s]\nBuilding query index... [2.55461s]\nBuilding seed filter... [0.646902s]\nSearching alignments... [24.5542s]\nProcessing query chunk 0, reference chunk 5, shape 0, index chunk 1.\nBuilding reference index... [5.59437s]\nBuilding query index... [2.92745s]\nBuilding seed filter... [0.465508s]\nSearching alignments... [23.9834s]\nProcessing query chunk 0, reference chunk 5, shape 0, index chunk 2.\nBuilding reference index... [5.36321s]\nBuilding query index... [2.81831s]\nBuilding seed filter... [0.406581s]\nSearching alignments... [23.4559s]\nProcessing query chunk 0, reference chunk 5, shape 0, index chunk 3.\nBuilding reference index... [4.67772s]\nBuilding query index... [2.55355s]\nBuilding seed filter... [0.577681s]\nSearching alignments... [23.273s]\nProcessing query chunk 0, reference chunk 5, shape 1, index chunk 0.\nBuilding reference index... [4.67497s]\nBuilding query index... [2.43199s]\nBuilding seed filter... [0.437823s]\nSearching alignments... [18.7119s]\nProcessing query chunk 0, reference chunk 5, shape 1, index chunk 1.\nBuilding reference index... [5.25987s]\nBuilding query index... [2.74898s]\nBuilding seed filter... [0.546571s]\nSearching alignments... [18.7676s]\nProcessing query chunk 0, reference chunk 5, shape 1, index chunk 2.\nBuilding reference index... [5.39167s]\nBuilding query index... [2.82701s]\nBuilding seed filter... [0.407915s]\nSearching alignments... [19.0071s]\nProcessing query chunk 0, reference chunk 5, shape 1, index chunk 3.\nBuilding reference index... [4.70756s]\nBuilding query index... [2.51954s]\nBuilding seed filter... [0.55462s]\nSearching alignments... [18.9201s]\nDeallocating buffers... [0.422291s]\nOpening temporary output file... [0.001063s]\nComputing alignments... [82.1537s]\nDeallocating reference... [0.350329s]\nLoading reference sequences... [4.34706s]\nBuilding reference histograms... [3.31421s]\nAllocating buffers... [0.000136s]\nInitializing temporary storage... [0.022244s]\nProcessing query chunk 0, reference chunk 6, shape 0, index chunk 0.\nBuilding reference index... [5.08269s]\nBuilding query index... [2.69745s]\nBuilding seed filter... [0.41747s]\nSearching alignments... [24.3948s]\nProcessing query chunk 0, reference chunk 6, shape 0, index chunk 1.\nBuilding reference index... [5.3607s]\nBuilding query index... [2.85691s]\nBuilding seed filter... [0.588208s]\nSearching alignments... [23.8762s]\nProcessing query chunk 0, reference chunk 6, shape 0, index chunk 2.\nBuilding reference index... [5.4374s]\nBuilding query index... [2.8198s]\nBuilding seed filter... [0.623494s]\nSearching alignments... [23.6s]\nProcessing query chunk 0, reference chunk 6, shape 0, index chunk 3.\nBuilding reference index... [4.65962s]\nBuilding query index... [2.48455s]\nBuilding seed filter... [0.541423s]\nSearching alignments... [23.4122s]\nProcessing query chunk 0, reference chunk 6, shape 1, index chunk 0.\nBuilding reference index... [4.84574s]\nBuilding query index... [2.30876s]\nBuilding seed filter... [0.412403s]\nSearching alignments... [18.8506s]\nProcessing query chunk 0, reference chunk 6, shape 1, index chunk 1.\nBuilding reference index... [5.27848s]\nBuilding query index... [2.78391s]\nBuilding seed filter... [0.662742s]\nSearching alignments... [18.8356s]\nProcessing query chunk 0, reference chunk 6, shape 1, index chunk 2.\nBuilding reference index... [5.40079s]\nBuilding query index... [2.76925s]\nBuilding seed filter... [0.606807s]\nSearching alignments... [18.6208s]\nProcessing query chunk 0, reference chunk 6, shape 1, index chunk 3.\nBuilding reference index... [4.64448s]\nBuilding query index... [2.49035s]\nBuilding seed filter... [0.507774s]\nSearching alignments... [18.7604s]\nDeallocating buffers... [0.430042s]\nOpening temporary output file... [0.000755s]\nComputing alignments... [83.1659s]\nDeallocating reference... [0.337471s]\nLoading reference sequences... [4.18567s]\nBuilding reference histograms... [3.00521s]\nAllocating buffers... [0.000105s]\nInitializing temporary storage... [0.023528s]\nProcessing query chunk 0, reference chunk 7, shape 0, index chunk 0.\nBuilding reference index... [5.35316s]\nBuilding query index... [2.61232s]\nBuilding seed filter... [0.498208s]\nSearching alignments... [24.5581s]\nProcessing query chunk 0, reference chunk 7, shape 0, index chunk 1.\nBuilding reference index... [5.47212s]\nBuilding query index... [3.06826s]\nBuilding seed filter... [0.502454s]\nSearching alignments... [24.4728s]\nProcessing query chunk 0, reference chunk 7, shape 0, index chunk 2.\nBuilding reference index... [5.46412s]\nBuilding query index... [2.73896s]\nBuilding seed filter... [0.667172s]\nSearching alignments... [23.6349s]\nProcessing query chunk 0, reference chunk 7, shape 0, index chunk 3.\nBuilding reference index... [4.64365s]\nBuilding query index... [2.53478s]\nBuilding seed filter... [0.458763s]\nSearching alignments... [23.5509s]\nProcessing query chunk 0, reference chunk 7, shape 1, index chunk 0.\nBuilding reference index... [4.75828s]\nBuilding query index... [2.44013s]\nBuilding seed filter... [0.418435s]\nSearching alignments... [18.8544s]\nProcessing query chunk 0, reference chunk 7, shape 1, index chunk 1.\nBuilding reference index... [5.31937s]\nBuilding query index... [2.78129s]\nBuilding seed filter... [0.50526s]\nSearching alignments... [18.6866s]\nProcessing query chunk 0, reference chunk 7, shape 1, index chunk 2.\nBuilding reference index... [5.43763s]\nBuilding query index... [2.77762s]\nBuilding seed filter... [0.575048s]\nSearching alignments... [18.8299s]\nProcessing query chunk 0, reference chunk 7, shape 1, index chunk 3.\nBuilding reference index... [5.06306s]\nBuilding query index... [2.59128s]\nBuilding seed filter... [0.4091s]\nSearching alignments... [19.0573s]\nDeallocating buffers... [0.435853s]\nOpening temporary output file... [0.000544s]\nComputing alignments... [82.9804s]\nDeallocating reference... [0.347557s]\nLoading reference sequences... [4.17397s]\nBuilding reference histograms... [3.20921s]\nAllocating buffers... [6e-05s]\nInitializing temporary storage... [0.013041s]\nProcessing query chunk 0, reference chunk 8, shape 0, index chunk 0.\nBuilding reference index... [5.25246s]\nBuilding query index... [2.54561s]\nBuilding seed filter... [0.722146s]\nSearching alignments... [24.4324s]\nProcessing query chunk 0, reference chunk 8, shape 0, index chunk 1.\nBuilding reference index... [5.42051s]\nBuilding query index... [2.88111s]\nBuilding seed filter... [0.507477s]\nSearching alignments... [23.6167s]\nProcessing query chunk 0, reference chunk 8, shape 0, index chunk 2.\nBuilding reference index... [5.49619s]\nBuilding query index... [2.76689s]\nBuilding seed filter... [0.407519s]\nSearching alignments... [23.4277s]\nProcessing query chunk 0, reference chunk 8, shape 0, index chunk 3.\nBuilding reference index... [4.80265s]\nBuilding query index... [2.65547s]\nBuilding seed filter... [0.548729s]\nSearching alignments... [23.1445s]\nProcessing query chunk 0, reference chunk 8, shape 1, index chunk 0.\nBuilding reference index... [4.68771s]\nBuilding query index... [2.39355s]\nBuilding seed filter... [0.55895s]\nSearching alignments... [18.8571s]\nProcessing query chunk 0, reference chunk 8, shape 1, index chunk 1.\nBuilding reference index... [5.30514s]\nBuilding query index... [2.82599s]\nBuilding seed filter... [0.624169s]\nSearching alignments... [18.8068s]\nProcessing query chunk 0, reference chunk 8, shape 1, index chunk 2.\nBuilding reference index... [5.36726s]\nBuilding query index... [2.85158s]\nBuilding seed filter... [0.545753s]\nSearching alignments... [18.813s]\nProcessing query chunk 0, reference chunk 8, shape 1, index chunk 3.\nBuilding reference index... [4.80212s]\nBuilding query index... [2.33891s]\nBuilding seed filter... [0.403054s]\nSearching alignments... [18.9561s]\nDeallocating buffers... [0.490722s]\nOpening temporary output file... [0.000703s]\nComputing alignments... [83.2088s]\nDeallocating reference... [0.352338s]\nLoading reference sequences... [4.06747s]\nBuilding reference histograms... [3.22104s]\nAllocating buffers... [0.000123s]\nInitializing temporary storage... [0.023506s]\nProcessing query chunk 0, reference chunk 9, shape 0, index chunk 0.\nBuilding reference index... [4.8198s]\nBuilding query index... [2.63362s]\nBuilding seed filter... [0.985752s]\nSearching alignments... [24.6605s]\nProcessing query chunk 0, reference chunk 9, shape 0, index chunk 1.\nBuilding reference index... [5.45139s]\nBuilding query index... [2.80587s]\nBuilding seed filter... [0.661222s]\nSearching alignments... [23.5568s]\nProcessing query chunk 0, reference chunk 9, shape 0, index chunk 2.\nBuilding reference index... [5.61279s]\nBuilding query index... [2.88886s]\nBuilding seed filter... [0.406468s]\nSearching alignments... [23.3212s]\nProcessing query chunk 0, reference chunk 9, shape 0, index chunk 3.\nBuilding reference index... [4.82566s]\nBuilding query index... [2.42939s]\nBuilding seed filter... [0.406922s]\nSearching alignments... [23.3027s]\nProcessing query chunk 0, reference chunk 9, shape 1, index chunk 0.\nBuilding reference index... [4.62976s]\nBuilding query index... [2.50204s]\nBuilding seed filter... [0.457353s]\nSearching alignments... [19.1742s]\nProcessing query chunk 0, reference chunk 9, shape 1, index chunk 1.\nBuilding reference index... [5.34247s]\nBuilding query index... [2.74628s]\nBuilding seed filter... [0.580061s]\nSearching alignments... [18.8949s]\nProcessing query chunk 0, reference chunk 9, shape 1, index chunk 2.\nBuilding reference index... [5.299s]\nBuilding query index... [2.78347s]\nBuilding seed filter... [0.522792s]\nSearching alignments... [18.6699s]\nProcessing query chunk 0, reference chunk 9, shape 1, index chunk 3.\nBuilding reference index... [4.76971s]\nBuilding query index... [2.40982s]\nBuilding seed filter... [0.409041s]\nSearching alignments... [19.2162s]\nDeallocating buffers... [0.47399s]\nOpening temporary output file... [0.001129s]\nComputing alignments... [81.8286s]\nDeallocating reference... [0.349434s]\nLoading reference sequences... [4.02183s]\nBuilding reference histograms... [3.28924s]\nAllocating buffers... [0.000118s]\nInitializing temporary storage... [0.020754s]\nProcessing query chunk 0, reference chunk 10, shape 0, index chunk 0.\nBuilding reference index... [4.46431s]\nBuilding query index... [2.58995s]\nBuilding seed filter... [0.915128s]\nSearching alignments... [24.4372s]\nProcessing query chunk 0, reference chunk 10, shape 0, index chunk 1.\nBuilding reference index... [5.24648s]\nBuilding query index... [2.88899s]\nBuilding seed filter... [0.546989s]\nSearching alignments... [23.7772s]\nProcessing query chunk 0, reference chunk 10, shape 0, index chunk 2.\nBuilding reference index... [5.41763s]\nBuilding query index... [2.84364s]\nBuilding seed filter... [0.4136s]\nSearching alignments... [23.2976s]\nProcessing query chunk 0, reference chunk 10, shape 0, index chunk 3.\nBuilding reference index... [4.66616s]\nBuilding query index... [2.59865s]\nBuilding seed filter... [0.47643s]\nSearching alignments... [23.2001s]\nProcessing query chunk 0, reference chunk 10, shape 1, index chunk 0.\nBuilding reference index... [4.80083s]\nBuilding query index... [2.46706s]\nBuilding seed filter... [0.618392s]\nSearching alignments... [18.9277s]\nProcessing query chunk 0, reference chunk 10, shape 1, index chunk 1.\nBuilding reference index... [5.26655s]\nBuilding query index... [2.78156s]\nBuilding seed filter... [0.500341s]\nSearching alignments... [19.0305s]\nProcessing query chunk 0, reference chunk 10, shape 1, index chunk 2.\nBuilding reference index... [5.68759s]\nBuilding query index... [2.79862s]\nBuilding seed filter... [0.565981s]\nSearching alignments... [18.6797s]\nProcessing query chunk 0, reference chunk 10, shape 1, index chunk 3.\nBuilding reference index... [4.62948s]\nBuilding query index... [2.3443s]\nBuilding seed filter... [0.410842s]\nSearching alignments... [18.7541s]\nDeallocating buffers... [0.377382s]\nOpening temporary output file... [0.000969s]\nComputing alignments... [82.9923s]\nDeallocating reference... [0.384539s]\nLoading reference sequences... [4.14763s]\nBuilding reference histograms... [3.02307s]\nAllocating buffers... [0.000118s]\nInitializing temporary storage... [0.022878s]\nProcessing query chunk 0, reference chunk 11, shape 0, index chunk 0.\nBuilding reference index... [5.5079s]\nBuilding query index... [2.53701s]\nBuilding seed filter... [0.403325s]\nSearching alignments... [24.301s]\nProcessing query chunk 0, reference chunk 11, shape 0, index chunk 1.\nBuilding reference index... [5.52068s]\nBuilding query index... [2.81543s]\nBuilding seed filter... [0.418047s]\nSearching alignments... [23.6778s]\nProcessing query chunk 0, reference chunk 11, shape 0, index chunk 2.\nBuilding reference index... [5.58593s]\nBuilding query index... [3.02032s]\nBuilding seed filter... [0.486964s]\nSearching alignments... [23.3092s]\nProcessing query chunk 0, reference chunk 11, shape 0, index chunk 3.\nBuilding reference index... [4.83054s]\nBuilding query index... [2.42093s]\nBuilding seed filter... [0.417479s]\nSearching alignments... [23.5466s]\nProcessing query chunk 0, reference chunk 11, shape 1, index chunk 0.\nBuilding reference index... [4.61932s]\nBuilding query index... [2.53658s]\nBuilding seed filter... [0.476378s]\nSearching alignments... [18.7568s]\nProcessing query chunk 0, reference chunk 11, shape 1, index chunk 1.\nBuilding reference index... [5.23274s]\nBuilding query index... [2.78829s]\nBuilding seed filter... [0.415623s]\nSearching alignments... [19.0992s]\nProcessing query chunk 0, reference chunk 11, shape 1, index chunk 2.\nBuilding reference index... [5.31647s]\nBuilding query index... [2.89177s]\nBuilding seed filter... [0.402291s]\nSearching alignments... [19.0874s]\nProcessing query chunk 0, reference chunk 11, shape 1, index chunk 3.\nBuilding reference index... [4.57441s]\nBuilding query index... [2.56406s]\nBuilding seed filter... [0.488569s]\nSearching alignments... [18.7349s]\nDeallocating buffers... [0.429355s]\nOpening temporary output file... [0.000898s]\nComputing alignments... [83.8601s]\nDeallocating reference... [0.356518s]\nLoading reference sequences... [4.05877s]\nBuilding reference histograms... [3.10839s]\nAllocating buffers... [5.8e-05s]\nInitializing temporary storage... [0.013715s]\nProcessing query chunk 0, reference chunk 12, shape 0, index chunk 0.\nBuilding reference index... [4.64975s]\nBuilding query index... [2.63813s]\nBuilding seed filter... [0.996719s]\nSearching alignments... [24.2245s]\nProcessing query chunk 0, reference chunk 12, shape 0, index chunk 1.\nBuilding reference index... [5.37765s]\nBuilding query index... [2.89394s]\nBuilding seed filter... [0.648899s]\nSearching alignments... [23.8779s]\nProcessing query chunk 0, reference chunk 12, shape 0, index chunk 2.\nBuilding reference index... [5.3923s]\nBuilding query index... [2.76507s]\nBuilding seed filter... [0.41687s]\nSearching alignments... [23.5037s]\nProcessing query chunk 0, reference chunk 12, shape 0, index chunk 3.\nBuilding reference index... [4.75428s]\nBuilding query index... [2.51338s]\nBuilding seed filter... [0.511215s]\nSearching alignments... [23.2813s]\nProcessing query chunk 0, reference chunk 12, shape 1, index chunk 0.\nBuilding reference index... [4.71337s]\nBuilding query index... [2.34976s]\nBuilding seed filter... [0.409012s]\nSearching alignments... [19.0124s]\nProcessing query chunk 0, reference chunk 12, shape 1, index chunk 1.\nBuilding reference index... [5.32792s]\nBuilding query index... [2.78314s]\nBuilding seed filter... [0.564916s]\nSearching alignments... [18.9428s]\nProcessing query chunk 0, reference chunk 12, shape 1, index chunk 2.\nBuilding reference index... [5.45649s]\nBuilding query index... [2.77923s]\nBuilding seed filter... [0.563274s]\nSearching alignments... [19.3731s]\nProcessing query chunk 0, reference chunk 12, shape 1, index chunk 3.\nBuilding reference index... [4.86966s]\nBuilding query index... [2.54247s]\nBuilding seed filter... [0.496209s]\nSearching alignments... [18.8584s]\nDeallocating buffers... [0.451956s]\nOpening temporary output file... [0.000772s]\nComputing alignments... [82.8156s]\nDeallocating reference... [0.368737s]\nLoading reference sequences... [4.0592s]\nBuilding reference histograms... [3.04764s]\nAllocating buffers... [0.000124s]\nInitializing temporary storage... [0.023203s]\nProcessing query chunk 0, reference chunk 13, shape 0, index chunk 0.\nBuilding reference index... [5.53567s]\nBuilding query index... [2.58131s]\nBuilding seed filter... [0.407453s]\nSearching alignments... [24.3522s]\nProcessing query chunk 0, reference chunk 13, shape 0, index chunk 1.\nBuilding reference index... [5.49506s]\nBuilding query index... [2.84519s]\nBuilding seed filter... [0.411832s]\nSearching alignments... [23.8246s]\nProcessing query chunk 0, reference chunk 13, shape 0, index chunk 2.\nBuilding reference index... [5.50643s]\nBuilding query index... [2.96284s]\nBuilding seed filter... [0.598384s]\nSearching alignments... [23.285s]\nProcessing query chunk 0, reference chunk 13, shape 0, index chunk 3.\nBuilding reference index... [4.79763s]\nBuilding query index... [2.53848s]\nBuilding seed filter... [0.490597s]\nSearching alignments... [23.3537s]\nProcessing query chunk 0, reference chunk 13, shape 1, index chunk 0.\nBuilding reference index... [4.59284s]\nBuilding query index... [2.50758s]\nBuilding seed filter... [0.412145s]\nSearching alignments... [18.9938s]\nProcessing query chunk 0, reference chunk 13, shape 1, index chunk 1.\nBuilding reference index... [5.72239s]\nBuilding query index... [2.81363s]\nBuilding seed filter... [0.455923s]\nSearching alignments... [18.9219s]\nProcessing query chunk 0, reference chunk 13, shape 1, index chunk 2.\nBuilding reference index... [5.34622s]\nBuilding query index... [2.77383s]\nBuilding seed filter... [0.403515s]\nSearching alignments... [18.6684s]\nProcessing query chunk 0, reference chunk 13, shape 1, index chunk 3.\nBuilding reference index... [4.82648s]\nBuilding query index... [2.6393s]\nBuilding seed filter... [0.481426s]\nSearching alignments... [18.8236s]\nDeallocating buffers... [0.437636s]\nOpening temporary output file... [0.001017s]\nComputing alignments... [83.5603s]\nDeallocating reference... [0.362508s]\nLoading reference sequences... [2.50727s]\nBuilding reference histograms... [1.8733s]\nAllocating buffers... [5.9e-05s]\nInitializing temporary storage... [0.013363s]\nProcessing query chunk 0, reference chunk 14, shape 0, index chunk 0.\nBuilding reference index... [2.93867s]\nBuilding query index... [2.55085s]\nBuilding seed filter... [0.366309s]\nSearching alignments... [16.5914s]\nProcessing query chunk 0, reference chunk 14, shape 0, index chunk 1.\nBuilding reference index... [3.25696s]\nBuilding query index... [2.71122s]\nBuilding seed filter... [0.334867s]\nSearching alignments... [16.1768s]\nProcessing query chunk 0, reference chunk 14, shape 0, index chunk 2.\nBuilding reference index... [3.30723s]\nBuilding query index... [2.90515s]\nBuilding seed filter... [0.375147s]\nSearching alignments... [15.7655s]\nProcessing query chunk 0, reference chunk 14, shape 0, index chunk 3.\nBuilding reference index... [2.79685s]\nBuilding query index... [2.28592s]\nBuilding seed filter... [0.453902s]\nSearching alignments... [16.0227s]\nProcessing query chunk 0, reference chunk 14, shape 1, index chunk 0.\nBuilding reference index... [2.76414s]\nBuilding query index... [2.24413s]\nBuilding seed filter... [0.464211s]\nSearching alignments... [12.7873s]\nProcessing query chunk 0, reference chunk 14, shape 1, index chunk 1.\nBuilding reference index... [3.26113s]\nBuilding query index... [2.76072s]\nBuilding seed filter... [0.335296s]\nSearching alignments... [12.5225s]\nProcessing query chunk 0, reference chunk 14, shape 1, index chunk 2.\nBuilding reference index... [3.22704s]\nBuilding query index... [2.52278s]\nBuilding seed filter... [0.328157s]\nSearching alignments... [12.8524s]\nProcessing query chunk 0, reference chunk 14, shape 1, index chunk 3.\nBuilding reference index... [2.76056s]\nBuilding query index... [2.58606s]\nBuilding seed filter... [0.328498s]\nSearching alignments... [12.5723s]\nDeallocating buffers... [0.183362s]\nOpening temporary output file... [0.000197s]\nComputing alignments... [59.7197s]\nDeallocating reference... [0.201122s]\nLoading reference sequences... [4.3e-05s]\nDeallocating buffers... [0.247009s]\nJoining output blocks... [31.6296s]\nDeallocating queries... [1.25439s]\nLoading query sequences... [1.85237s]\nMasking queries... [4.12864s]\nBuilding query seed set... [9e-06s]\nBuilding query histograms... [0.2579s]\nAllocating buffers... [8.5e-05s]\nLoading reference sequences... [4.02442s]\nBuilding reference histograms... [2.93842s]\nAllocating buffers... [0.00013s]\nInitializing temporary storage... [0.024806s]\nProcessing query chunk 1, reference chunk 0, shape 0, index chunk 0.\nBuilding reference index... [5.25494s]\nBuilding query index... [0.357157s]\nBuilding seed filter... [0.399363s]\nSearching alignments... [3.55582s]\nProcessing query chunk 1, reference chunk 0, shape 0, index chunk 1.\nBuilding reference index... [5.05184s]\nBuilding query index... [0.417635s]\nBuilding seed filter... [0.617508s]\nSearching alignments... [3.56195s]\nProcessing query chunk 1, reference chunk 0, shape 0, index chunk 2.\nBuilding reference index... [5.28032s]\nBuilding query index... [0.443848s]\nBuilding seed filter... [0.408321s]\nSearching alignments... [3.65607s]\nProcessing query chunk 1, reference chunk 0, shape 0, index chunk 3.\nBuilding reference index... [4.55485s]\nBuilding query index... [0.361937s]\nBuilding seed filter... [0.273054s]\nSearching alignments... [3.59542s]\nProcessing query chunk 1, reference chunk 0, shape 1, index chunk 0.\nBuilding reference index... [5.21686s]\nBuilding query index... [0.377893s]\nBuilding seed filter... [0.285524s]\nSearching alignments... [2.91128s]\nProcessing query chunk 1, reference chunk 0, shape 1, index chunk 1.\nBuilding reference index... [5.26088s]\nBuilding query index... [0.415407s]\nBuilding seed filter... [0.442448s]\nSearching alignments... [3.05823s]\nProcessing query chunk 1, reference chunk 0, shape 1, index chunk 2.\nBuilding reference index... [5.0739s]\nBuilding query index... [0.411538s]\nBuilding seed filter... [0.269825s]\nSearching alignments... [2.84103s]\nProcessing query chunk 1, reference chunk 0, shape 1, index chunk 3.\nBuilding reference index... [4.49977s]\nBuilding query index... [0.391445s]\nBuilding seed filter... [0.299334s]\nSearching alignments... [3.01818s]\nDeallocating buffers... [0.410721s]\nOpening temporary output file... [0.000524s]\nComputing alignments... [11.3889s]\nDeallocating reference... [0.332521s]\nLoading reference sequences... [4.05837s]\nBuilding reference histograms... [3.05814s]\nAllocating buffers... [0.000138s]\nInitializing temporary storage... [0.024081s]\nProcessing query chunk 1, reference chunk 1, shape 0, index chunk 0.\nBuilding reference index... [5.16566s]\nBuilding query index... [0.369932s]\nBuilding seed filter... [0.295772s]\nSearching alignments... [3.67368s]\nProcessing query chunk 1, reference chunk 1, shape 0, index chunk 1.\nBuilding reference index... [5.49672s]\nBuilding query index... [0.38237s]\nBuilding seed filter... [0.305888s]\nSearching alignments... [3.50971s]\nProcessing query chunk 1, reference chunk 1, shape 0, index chunk 2.\nBuilding reference index... [5.30079s]\nBuilding query index... [0.42455s]\nBuilding seed filter... [0.552047s]\nSearching alignments... [3.48126s]\nProcessing query chunk 1, reference chunk 1, shape 0, index chunk 3.\nBuilding reference index... [4.4953s]\nBuilding query index... [0.418024s]\nBuilding seed filter... [0.317561s]\nSearching alignments... [3.77407s]\nProcessing query chunk 1, reference chunk 1, shape 1, index chunk 0.\nBuilding reference index... [4.55324s]\nBuilding query index... [0.31451s]\nBuilding seed filter... [0.264027s]\nSearching alignments... [2.90929s]\nProcessing query chunk 1, reference chunk 1, shape 1, index chunk 1.\nBuilding reference index... [5.09366s]\nBuilding query index... [0.373636s]\nBuilding seed filter... [0.355707s]\nSearching alignments... [3.09951s]\nProcessing query chunk 1, reference chunk 1, shape 1, index chunk 2.\nBuilding reference index... [5.1955s]\nBuilding query index... [0.420574s]\nBuilding seed filter... [0.283495s]\nSearching alignments... [2.86994s]\nProcessing query chunk 1, reference chunk 1, shape 1, index chunk 3.\nBuilding reference index... [4.5107s]\nBuilding query index... [0.363762s]\nBuilding seed filter... [0.314517s]\nSearching alignments... [2.99893s]\nDeallocating buffers... [0.41025s]\nOpening temporary output file... [0.000688s]\nComputing alignments... [11.3021s]\nDeallocating reference... [0.341423s]\nLoading reference sequences... [4.04807s]\nBuilding reference histograms... [3.03701s]\nAllocating buffers... [9.4e-05s]\nInitializing temporary storage... [0.016197s]\nProcessing query chunk 1, reference chunk 2, shape 0, index chunk 0.\nBuilding reference index... [5.38977s]\nBuilding query index... [0.383709s]\nBuilding seed filter... [0.291757s]\nSearching alignments... [3.58291s]\nProcessing query chunk 1, reference chunk 2, shape 0, index chunk 1.\nBuilding reference index... [5.03314s]\nBuilding query index... [0.388532s]\nBuilding seed filter... [0.657464s]\nSearching alignments... [3.52472s]\nProcessing query chunk 1, reference chunk 2, shape 0, index chunk 2.\nBuilding reference index... [5.15499s]\nBuilding query index... [0.473372s]\nBuilding seed filter... [0.437782s]\nSearching alignments... [3.66967s]\nProcessing query chunk 1, reference chunk 2, shape 0, index chunk 3.\nBuilding reference index... [4.54298s]\nBuilding query index... [0.397157s]\nBuilding seed filter... [0.269337s]\nSearching alignments... [3.68308s]\nProcessing query chunk 1, reference chunk 2, shape 1, index chunk 0.\nBuilding reference index... [4.43642s]\nBuilding query index... [0.393123s]\nBuilding seed filter... [0.519665s]\nSearching alignments... [2.90536s]\nProcessing query chunk 1, reference chunk 2, shape 1, index chunk 1.\nBuilding reference index... [5.07417s]\nBuilding query index... [0.387968s]\nBuilding seed filter... [0.292629s]\nSearching alignments... [3.01701s]\nProcessing query chunk 1, reference chunk 2, shape 1, index chunk 2.\nBuilding reference index... [5.29385s]\nBuilding query index... [0.37643s]\nBuilding seed filter... [0.271995s]\nSearching alignments... [2.8825s]\nProcessing query chunk 1, reference chunk 2, shape 1, index chunk 3.\nBuilding reference index... [4.41004s]\nBuilding query index... [0.384441s]\nBuilding seed filter... [0.331672s]\nSearching alignments... [3.02911s]\nDeallocating buffers... [0.427265s]\nOpening temporary output file... [0.000229s]\nComputing alignments... [11.4123s]\nDeallocating reference... [0.347109s]\nLoading reference sequences... [3.99162s]\nBuilding reference histograms... [2.93747s]\nAllocating buffers... [0.000129s]\nInitializing temporary storage... [0.024662s]\nProcessing query chunk 1, reference chunk 3, shape 0, index chunk 0.\nBuilding reference index... [5.23093s]\nBuilding query index... [0.417976s]\nBuilding seed filter... [0.457188s]\nSearching alignments... [3.56555s]\nProcessing query chunk 1, reference chunk 3, shape 0, index chunk 1.\nBuilding reference index... [5.04727s]\nBuilding query index... [0.424554s]\nBuilding seed filter... [0.643806s]\nSearching alignments... [3.55337s]\nProcessing query chunk 1, reference chunk 3, shape 0, index chunk 2.\nBuilding reference index... [5.2491s]\nBuilding query index... [0.384096s]\nBuilding seed filter... [0.420409s]\nSearching alignments... [3.67994s]\nProcessing query chunk 1, reference chunk 3, shape 0, index chunk 3.\nBuilding reference index... [4.59244s]\nBuilding query index... [0.366358s]\nBuilding seed filter... [0.267972s]\nSearching alignments... [3.58266s]\nProcessing query chunk 1, reference chunk 3, shape 1, index chunk 0.\nBuilding reference index... [4.48098s]\nBuilding query index... [0.359206s]\nBuilding seed filter... [0.515856s]\nSearching alignments... [2.89665s]\nProcessing query chunk 1, reference chunk 3, shape 1, index chunk 1.\nBuilding reference index... [5.14285s]\nBuilding query index... [0.418361s]\nBuilding seed filter... [0.272073s]\nSearching alignments... [3.04235s]\nProcessing query chunk 1, reference chunk 3, shape 1, index chunk 2.\nBuilding reference index... [5.39675s]\nBuilding query index... [0.424032s]\nBuilding seed filter... [0.273042s]\nSearching alignments... [2.86858s]\nProcessing query chunk 1, reference chunk 3, shape 1, index chunk 3.\nBuilding reference index... [4.44707s]\nBuilding query index... [0.3853s]\nBuilding seed filter... [0.298093s]\nSearching alignments... [3.00852s]\nDeallocating buffers... [0.419989s]\nOpening temporary output file... [0.000444s]\nComputing alignments... [11.2603s]\nDeallocating reference... [0.338215s]\nLoading reference sequences... [4.41423s]\nBuilding reference histograms... [3.11674s]\nAllocating buffers... [0.000124s]\nInitializing temporary storage... [0.021086s]\nProcessing query chunk 1, reference chunk 4, shape 0, index chunk 0.\nBuilding reference index... [5.08941s]\nBuilding query index... [0.398594s]\nBuilding seed filter... [0.460484s]\nSearching alignments... [3.55752s]\nProcessing query chunk 1, reference chunk 4, shape 0, index chunk 1.\nBuilding reference index... [5.02939s]\nBuilding query index... [0.450748s]\nBuilding seed filter... [0.578252s]\nSearching alignments... [3.54993s]\nProcessing query chunk 1, reference chunk 4, shape 0, index chunk 2.\nBuilding reference index... [5.35886s]\nBuilding query index... [0.435175s]\nBuilding seed filter... [0.454903s]\nSearching alignments... [3.64058s]\nProcessing query chunk 1, reference chunk 4, shape 0, index chunk 3.\nBuilding reference index... [4.54412s]\nBuilding query index... [0.385255s]\nBuilding seed filter... [0.286911s]\nSearching alignments... [3.5442s]\nProcessing query chunk 1, reference chunk 4, shape 1, index chunk 0.\nBuilding reference index... [4.51497s]\nBuilding query index... [0.328079s]\nBuilding seed filter... [0.405434s]\nSearching alignments... [3.0136s]\nProcessing query chunk 1, reference chunk 4, shape 1, index chunk 1.\nBuilding reference index... [5.20068s]\nBuilding query index... [0.381208s]\nBuilding seed filter... [0.26731s]\nSearching alignments... [2.90028s]\nProcessing query chunk 1, reference chunk 4, shape 1, index chunk 2.\nBuilding reference index... [5.20175s]\nBuilding query index... [0.374026s]\nBuilding seed filter... [0.357162s]\nSearching alignments... [3.10238s]\nProcessing query chunk 1, reference chunk 4, shape 1, index chunk 3.\nBuilding reference index... [4.44315s]\nBuilding query index... [0.344653s]\nBuilding seed filter... [0.465475s]\nSearching alignments... [3.02987s]\nDeallocating buffers... [0.41315s]\nOpening temporary output file... [0.000496s]\nComputing alignments... [11.3522s]\nDeallocating reference... [0.311336s]\nLoading reference sequences... [3.96345s]\nBuilding reference histograms... [2.96901s]\nAllocating buffers... [0.000121s]\nInitializing temporary storage... [0.02231s]\nProcessing query chunk 1, reference chunk 5, shape 0, index chunk 0.\nBuilding reference index... [5.30441s]\nBuilding query index... [0.356223s]\nBuilding seed filter... [0.272806s]\nSearching alignments... [3.65833s]\nProcessing query chunk 1, reference chunk 5, shape 0, index chunk 1.\nBuilding reference index... [5.16817s]\nBuilding query index... [0.380062s]\nBuilding seed filter... [0.271189s]\nSearching alignments... [3.50568s]\nProcessing query chunk 1, reference chunk 5, shape 0, index chunk 2.\nBuilding reference index... [5.21011s]\nBuilding query index... [0.389407s]\nBuilding seed filter... [0.313043s]\nSearching alignments... [3.59121s]\nProcessing query chunk 1, reference chunk 5, shape 0, index chunk 3.\nBuilding reference index... [4.36017s]\nBuilding query index... [0.324661s]\nBuilding seed filter... [0.29405s]\nSearching alignments... [3.57664s]\nProcessing query chunk 1, reference chunk 5, shape 1, index chunk 0.\nBuilding reference index... [4.37808s]\nBuilding query index... [0.381087s]\nBuilding seed filter... [0.297647s]\nSearching alignments... [3.03119s]\nProcessing query chunk 1, reference chunk 5, shape 1, index chunk 1.\nBuilding reference index... [5.03s]\nBuilding query index... [0.403647s]\nBuilding seed filter... [0.273458s]\nSearching alignments... [2.90487s]\nProcessing query chunk 1, reference chunk 5, shape 1, index chunk 2.\nBuilding reference index... [5.26576s]\nBuilding query index... [0.424999s]\nBuilding seed filter... [0.319295s]\nSearching alignments... [2.98353s]\nProcessing query chunk 1, reference chunk 5, shape 1, index chunk 3.\nBuilding reference index... [4.26575s]\nBuilding query index... [0.362012s]\nBuilding seed filter... [0.354757s]\nSearching alignments... [2.91154s]\nDeallocating buffers... [0.205302s]\nOpening temporary output file... [0.000213s]\nComputing alignments... [11.2832s]\nDeallocating reference... [0.31272s]\nLoading reference sequences... [3.94312s]\nBuilding reference histograms... [2.76174s]\nAllocating buffers... [0.000104s]\nInitializing temporary storage... [0.020522s]\nProcessing query chunk 1, reference chunk 6, shape 0, index chunk 0.\nBuilding reference index... [5.56074s]\nBuilding query index... [0.332884s]\nBuilding seed filter... [0.271092s]\nSearching alignments... [3.66097s]\nProcessing query chunk 1, reference chunk 6, shape 0, index chunk 1.\nBuilding reference index... [5.24621s]\nBuilding query index... [0.413819s]\nBuilding seed filter... [0.263705s]\nSearching alignments... [3.52732s]\nProcessing query chunk 1, reference chunk 6, shape 0, index chunk 2.\nBuilding reference index... [5.34263s]\nBuilding query index... [0.443425s]\nBuilding seed filter... [0.514847s]\nSearching alignments... [3.49857s]\nProcessing query chunk 1, reference chunk 6, shape 0, index chunk 3.\nBuilding reference index... [4.64946s]\nBuilding query index... [0.397856s]\nBuilding seed filter... [0.310136s]\nSearching alignments... [3.76185s]\nProcessing query chunk 1, reference chunk 6, shape 1, index chunk 0.\nBuilding reference index... [4.51152s]\nBuilding query index... [0.363972s]\nBuilding seed filter... [0.288498s]\nSearching alignments... [2.90348s]\nProcessing query chunk 1, reference chunk 6, shape 1, index chunk 1.\nBuilding reference index... [5.11956s]\nBuilding query index... [0.37576s]\nBuilding seed filter... [0.374722s]\nSearching alignments... [3.1121s]\nProcessing query chunk 1, reference chunk 6, shape 1, index chunk 2.\nBuilding reference index... [5.09394s]\nBuilding query index... [0.416261s]\nBuilding seed filter... [0.272653s]\nSearching alignments... [2.88231s]\nProcessing query chunk 1, reference chunk 6, shape 1, index chunk 3.\nBuilding reference index... [4.58299s]\nBuilding query index... [0.43574s]\nBuilding seed filter... [0.321065s]\nSearching alignments... [3.07812s]\nDeallocating buffers... [0.401967s]\nOpening temporary output file... [0.000851s]\nComputing alignments... [11.391s]\nDeallocating reference... [0.351199s]\nLoading reference sequences... [3.90859s]\nBuilding reference histograms... [3.21371s]\nAllocating buffers... [0.000127s]\nInitializing temporary storage... [0.023551s]\nProcessing query chunk 1, reference chunk 7, shape 0, index chunk 0.\nBuilding reference index... [5.09414s]\nBuilding query index... [0.377652s]\nBuilding seed filter... [0.519329s]\nSearching alignments... [3.49727s]\nProcessing query chunk 1, reference chunk 7, shape 0, index chunk 1.\nBuilding reference index... [4.95667s]\nBuilding query index... [0.490099s]\nBuilding seed filter... [0.353237s]\nSearching alignments... [3.77092s]\nProcessing query chunk 1, reference chunk 7, shape 0, index chunk 2.\nBuilding reference index... [5.22546s]\nBuilding query index... [0.407692s]\nBuilding seed filter... [0.277024s]\nSearching alignments... [3.55785s]\nProcessing query chunk 1, reference chunk 7, shape 0, index chunk 3.\nBuilding reference index... [4.5707s]\nBuilding query index... [0.365489s]\nBuilding seed filter... [0.391435s]\nSearching alignments... [3.59825s]\nProcessing query chunk 1, reference chunk 7, shape 1, index chunk 0.\nBuilding reference index... [4.65892s]\nBuilding query index... [0.351925s]\nBuilding seed filter... [0.272159s]\nSearching alignments... [2.85781s]\nProcessing query chunk 1, reference chunk 7, shape 1, index chunk 1.\nBuilding reference index... [5.09465s]\nBuilding query index... [0.374797s]\nBuilding seed filter... [0.314698s]\nSearching alignments... [3.07502s]\nProcessing query chunk 1, reference chunk 7, shape 1, index chunk 2.\nBuilding reference index... [5.33389s]\nBuilding query index... [0.402677s]\nBuilding seed filter... [0.278921s]\nSearching alignments... [2.86259s]\nProcessing query chunk 1, reference chunk 7, shape 1, index chunk 3.\nBuilding reference index... [4.42936s]\nBuilding query index... [0.413056s]\nBuilding seed filter... [0.295912s]\nSearching alignments... [2.88017s]\nDeallocating buffers... [0.414263s]\nOpening temporary output file... [0.000213s]\nComputing alignments... [11.1918s]\nDeallocating reference... [0.342822s]\nLoading reference sequences... [3.96693s]\nBuilding reference histograms... [3.02188s]\nAllocating buffers... [0.000104s]\nInitializing temporary storage... [0.020244s]\nProcessing query chunk 1, reference chunk 8, shape 0, index chunk 0.\nBuilding reference index... [4.74555s]\nBuilding query index... [0.39203s]\nBuilding seed filter... [0.904806s]\nSearching alignments... [3.55921s]\nProcessing query chunk 1, reference chunk 8, shape 0, index chunk 1.\nBuilding reference index... [5.02696s]\nBuilding query index... [0.425662s]\nBuilding seed filter... [0.328027s]\nSearching alignments... [3.7863s]\nProcessing query chunk 1, reference chunk 8, shape 0, index chunk 2.\nBuilding reference index... [5.31855s]\nBuilding query index... [0.390736s]\nBuilding seed filter... [0.266762s]\nSearching alignments... [3.4777s]\nProcessing query chunk 1, reference chunk 8, shape 0, index chunk 3.\nBuilding reference index... [4.58416s]\nBuilding query index... [0.34237s]\nBuilding seed filter... [0.426532s]\nSearching alignments... [3.58729s]\nProcessing query chunk 1, reference chunk 8, shape 1, index chunk 0.\nBuilding reference index... [4.44295s]\nBuilding query index... [0.315735s]\nBuilding seed filter... [0.263013s]\nSearching alignments... [2.92162s]\nProcessing query chunk 1, reference chunk 8, shape 1, index chunk 1.\nBuilding reference index... [5.13596s]\nBuilding query index... [0.380939s]\nBuilding seed filter... [0.333816s]\nSearching alignments... [2.99057s]\nProcessing query chunk 1, reference chunk 8, shape 1, index chunk 2.\nBuilding reference index... [5.33976s]\nBuilding query index... [0.369046s]\nBuilding seed filter... [0.270096s]\nSearching alignments... [2.84608s]\nProcessing query chunk 1, reference chunk 8, shape 1, index chunk 3.\nBuilding reference index... [4.44198s]\nBuilding query index... [0.375761s]\nBuilding seed filter... [0.268109s]\nSearching alignments... [2.82031s]\nDeallocating buffers... [0.432293s]\nOpening temporary output file... [0.000201s]\nComputing alignments... [11.3245s]\nDeallocating reference... [0.331401s]\nLoading reference sequences... [3.91625s]\nBuilding reference histograms... [2.99943s]\nAllocating buffers... [0.000118s]\nInitializing temporary storage... [0.023136s]\nProcessing query chunk 1, reference chunk 9, shape 0, index chunk 0.\nBuilding reference index... [5.57048s]\nBuilding query index... [0.406549s]\nBuilding seed filter... [0.266862s]\nSearching alignments... [3.69026s]\nProcessing query chunk 1, reference chunk 9, shape 0, index chunk 1.\nBuilding reference index... [5.23074s]\nBuilding query index... [0.382566s]\nBuilding seed filter... [0.267344s]\nSearching alignments... [3.5814s]\nProcessing query chunk 1, reference chunk 9, shape 0, index chunk 2.\nBuilding reference index... [5.35658s]\nBuilding query index... [0.388531s]\nBuilding seed filter... [0.581755s]\nSearching alignments... [3.52074s]\nProcessing query chunk 1, reference chunk 9, shape 0, index chunk 3.\nBuilding reference index... [4.6087s]\nBuilding query index... [0.403352s]\nBuilding seed filter... [0.269487s]\nSearching alignments... [3.61914s]\nProcessing query chunk 1, reference chunk 9, shape 1, index chunk 0.\nBuilding reference index... [4.48195s]\nBuilding query index... [0.415676s]\nBuilding seed filter... [0.381133s]\nSearching alignments... [3.01948s]\nProcessing query chunk 1, reference chunk 9, shape 1, index chunk 1.\nBuilding reference index... [5.1306s]\nBuilding query index... [0.376998s]\nBuilding seed filter... [0.268373s]\nSearching alignments... [2.9451s]\nProcessing query chunk 1, reference chunk 9, shape 1, index chunk 2.\nBuilding reference index... [5.17495s]\nBuilding query index... [0.379482s]\nBuilding seed filter... [0.418597s]\nSearching alignments... [2.98226s]\nProcessing query chunk 1, reference chunk 9, shape 1, index chunk 3.\nBuilding reference index... [4.30298s]\nBuilding query index... [0.326797s]\nBuilding seed filter... [0.45505s]\nSearching alignments... [2.94135s]\nDeallocating buffers... [0.435509s]\nOpening temporary output file... [0.00056s]\nComputing alignments... [11.4553s]\nDeallocating reference... [0.340565s]\nLoading reference sequences... [3.93172s]\nBuilding reference histograms... [2.70486s]\nAllocating buffers... [8.2e-05s]\nInitializing temporary storage... [0.013091s]\nProcessing query chunk 1, reference chunk 10, shape 0, index chunk 0.\nBuilding reference index... [5.40726s]\nBuilding query index... [0.35499s]\nBuilding seed filter... [0.269663s]\nSearching alignments... [3.5189s]\nProcessing query chunk 1, reference chunk 10, shape 0, index chunk 1.\nBuilding reference index... [5.29117s]\nBuilding query index... [0.398633s]\nBuilding seed filter... [0.466235s]\nSearching alignments... [3.51937s]\nProcessing query chunk 1, reference chunk 10, shape 0, index chunk 2.\nBuilding reference index... [5.2322s]\nBuilding query index... [0.399928s]\nBuilding seed filter... [0.388809s]\nSearching alignments... [3.71063s]\nProcessing query chunk 1, reference chunk 10, shape 0, index chunk 3.\nBuilding reference index... [4.74194s]\nBuilding query index... [0.418052s]\nBuilding seed filter... [0.281683s]\nSearching alignments... [4.07202s]\nProcessing query chunk 1, reference chunk 10, shape 1, index chunk 0.\nBuilding reference index... [4.57412s]\nBuilding query index... [0.387589s]\nBuilding seed filter... [0.443131s]\nSearching alignments... [2.92167s]\nProcessing query chunk 1, reference chunk 10, shape 1, index chunk 1.\nBuilding reference index... [5.02807s]\nBuilding query index... [0.381416s]\nBuilding seed filter... [0.273954s]\nSearching alignments... [2.88658s]\nProcessing query chunk 1, reference chunk 10, shape 1, index chunk 2.\nBuilding reference index... [5.23861s]\nBuilding query index... [0.432308s]\nBuilding seed filter... [0.320248s]\nSearching alignments... [2.93697s]\nProcessing query chunk 1, reference chunk 10, shape 1, index chunk 3.\nBuilding reference index... [4.31089s]\nBuilding query index... [0.378675s]\nBuilding seed filter... [0.368639s]\nSearching alignments... [2.98279s]\nDeallocating buffers... [0.390095s]\nOpening temporary output file... [0.000819s]\nComputing alignments... [11.0739s]\nDeallocating reference... [0.328782s]\nLoading reference sequences... [4.67669s]\nBuilding reference histograms... [2.88315s]\nAllocating buffers... [0.000111s]\nInitializing temporary storage... [0.019921s]\nProcessing query chunk 1, reference chunk 11, shape 0, index chunk 0.\nBuilding reference index... [4.8088s]\nBuilding query index... [0.353311s]\nBuilding seed filter... [0.614685s]\nSearching alignments... [3.57497s]\nProcessing query chunk 1, reference chunk 11, shape 0, index chunk 1.\nBuilding reference index... [5.00446s]\nBuilding query index... [0.373035s]\nBuilding seed filter... [0.338813s]\nSearching alignments... [3.80077s]\nProcessing query chunk 1, reference chunk 11, shape 0, index chunk 2.\nBuilding reference index... [5.20827s]\nBuilding query index... [0.398269s]\nBuilding seed filter... [0.272009s]\nSearching alignments... [3.49222s]\nProcessing query chunk 1, reference chunk 11, shape 0, index chunk 3.\nBuilding reference index... [4.66726s]\nBuilding query index... [0.386901s]\nBuilding seed filter... [0.537451s]\nSearching alignments... [3.49229s]\nProcessing query chunk 1, reference chunk 11, shape 1, index chunk 0.\nBuilding reference index... [4.49117s]\nBuilding query index... [0.35123s]\nBuilding seed filter... [0.267947s]\nSearching alignments... [2.87887s]\nProcessing query chunk 1, reference chunk 11, shape 1, index chunk 1.\nBuilding reference index... [5.17264s]\nBuilding query index... [0.387173s]\nBuilding seed filter... [0.570502s]\nSearching alignments... [2.91637s]\nProcessing query chunk 1, reference chunk 11, shape 1, index chunk 2.\nBuilding reference index... [5.22211s]\nBuilding query index... [0.381064s]\nBuilding seed filter... [0.300808s]\nSearching alignments... [3.07566s]\nProcessing query chunk 1, reference chunk 11, shape 1, index chunk 3.\nBuilding reference index... [4.43488s]\nBuilding query index... [0.37788s]\nBuilding seed filter... [0.508257s]\nSearching alignments... [2.93412s]\nDeallocating buffers... [0.413104s]\nOpening temporary output file... [0.000174s]\nComputing alignments... [11.2066s]\nDeallocating reference... [0.354427s]\nLoading reference sequences... [3.58771s]\nBuilding reference histograms... [2.82881s]\nAllocating buffers... [0.000102s]\nInitializing temporary storage... [0.021316s]\nProcessing query chunk 1, reference chunk 12, shape 0, index chunk 0.\nBuilding reference index... [4.65161s]\nBuilding query index... [0.367263s]\nBuilding seed filter... [0.983543s]\nSearching alignments... [3.25658s]\nProcessing query chunk 1, reference chunk 12, shape 0, index chunk 1.\nBuilding reference index... [4.92843s]\nBuilding query index... [0.407229s]\nBuilding seed filter... [0.328237s]\nSearching alignments... [3.41533s]\nProcessing query chunk 1, reference chunk 12, shape 0, index chunk 2.\nBuilding reference index... [5.31336s]\nBuilding query index... [0.418652s]\nBuilding seed filter... [0.274388s]\nSearching alignments... [3.14933s]\nProcessing query chunk 1, reference chunk 12, shape 0, index chunk 3.\nBuilding reference index... [4.56068s]\nBuilding query index... [0.378538s]\nBuilding seed filter... [0.358118s]\nSearching alignments... [3.32678s]\nProcessing query chunk 1, reference chunk 12, shape 1, index chunk 0.\nBuilding reference index... [4.3338s]\nBuilding query index... [0.309254s]\nBuilding seed filter... [0.465273s]\nSearching alignments... [2.56559s]\nProcessing query chunk 1, reference chunk 12, shape 1, index chunk 1.\nBuilding reference index... [5.21134s]\nBuilding query index... [0.369229s]\nBuilding seed filter... [0.277858s]\nSearching alignments... [2.70814s]\nProcessing query chunk 1, reference chunk 12, shape 1, index chunk 2.\nBuilding reference index... [5.41192s]\nBuilding query index... [0.415427s]\nBuilding seed filter... [0.395603s]\nSearching alignments... [2.55388s]\nProcessing query chunk 1, reference chunk 12, shape 1, index chunk 3.\nBuilding reference index... [4.80472s]\nBuilding query index... [0.396147s]\nBuilding seed filter... [0.273361s]\nSearching alignments... [2.54299s]\nDeallocating buffers... [0.448094s]\nOpening temporary output file... [0.000628s]\nComputing alignments... [10.2384s]\nDeallocating reference... [0.006876s]\nLoading reference sequences... [3.46235s]\nBuilding reference histograms... [2.75902s]\nAllocating buffers... [0.000118s]\nInitializing temporary storage... [0.024136s]\nProcessing query chunk 1, reference chunk 13, shape 0, index chunk 0.\nBuilding reference index... [4.40072s]\nBuilding query index... [0.391286s]\nBuilding seed filter... [0.542338s]\nSearching alignments... [3.68633s]\nProcessing query chunk 1, reference chunk 13, shape 0, index chunk 1.\nBuilding reference index... [5.12267s]\nBuilding query index... [0.444488s]\nBuilding seed filter... [0.266576s]\nSearching alignments... [3.31473s]\nProcessing query chunk 1, reference chunk 13, shape 0, index chunk 2.\nBuilding reference index... [5.495s]\nBuilding query index... [0.488867s]\nBuilding seed filter... [0.270429s]\nSearching alignments... [3.20739s]\nProcessing query chunk 1, reference chunk 13, shape 0, index chunk 3.\nBuilding reference index... [4.59934s]\nBuilding query index... [0.355276s]\nBuilding seed filter... [0.339879s]\nSearching alignments... [3.27077s]\nProcessing query chunk 1, reference chunk 13, shape 1, index chunk 0.\nBuilding reference index... [4.51689s]\nBuilding query index... [0.381153s]\nBuilding seed filter... [0.464235s]\nSearching alignments... [2.65859s]\nProcessing query chunk 1, reference chunk 13, shape 1, index chunk 1.\nBuilding reference index... [5.23171s]\nBuilding query index... [0.384068s]\nBuilding seed filter... [0.313758s]\nSearching alignments... [2.59397s]\nProcessing query chunk 1, reference chunk 13, shape 1, index chunk 2.\nBuilding reference index... [5.14527s]\nBuilding query index... [0.374864s]\nBuilding seed filter... [0.517091s]\nSearching alignments... [2.55944s]\nProcessing query chunk 1, reference chunk 13, shape 1, index chunk 3.\nBuilding reference index... [4.46023s]\nBuilding query index... [0.399531s]\nBuilding seed filter... [0.269164s]\nSearching alignments... [2.61205s]\nDeallocating buffers... [0.433005s]\nOpening temporary output file... [0.000466s]\nComputing alignments... [10.2682s]\nDeallocating reference... [0.006708s]\nLoading reference sequences... [2.12202s]\nBuilding reference histograms... [1.76198s]\nAllocating buffers... [0.000117s]\nInitializing temporary storage... [0.025688s]\nProcessing query chunk 1, reference chunk 14, shape 0, index chunk 0.\nBuilding reference index... [2.7198s]\nBuilding query index... [0.387705s]\nBuilding seed filter... [0.189626s]\nSearching alignments... [2.24603s]\nProcessing query chunk 1, reference chunk 14, shape 0, index chunk 1.\nBuilding reference index... [3.59113s]\nBuilding query index... [0.460888s]\nBuilding seed filter... [0.191189s]\nSearching alignments... [2.17964s]\nProcessing query chunk 1, reference chunk 14, shape 0, index chunk 2.\nBuilding reference index... [3.20049s]\nBuilding query index... [0.409732s]\nBuilding seed filter... [0.190603s]\nSearching alignments... [2.12744s]\nProcessing query chunk 1, reference chunk 14, shape 0, index chunk 3.\nBuilding reference index... [2.97238s]\nBuilding query index... [0.377838s]\nBuilding seed filter... [0.192356s]\nSearching alignments... [2.14538s]\nProcessing query chunk 1, reference chunk 14, shape 1, index chunk 0.\nBuilding reference index... [2.80863s]\nBuilding query index... [0.350751s]\nBuilding seed filter... [0.191376s]\nSearching alignments... [1.74809s]\nProcessing query chunk 1, reference chunk 14, shape 1, index chunk 1.\nBuilding reference index... [3.20348s]\nBuilding query index... [0.346703s]\nBuilding seed filter... [0.212893s]\nSearching alignments... [1.76861s]\nProcessing query chunk 1, reference chunk 14, shape 1, index chunk 2.\nBuilding reference index... [3.03129s]\nBuilding query index... [0.410109s]\nBuilding seed filter... [0.316784s]\nSearching alignments... [1.90334s]\nProcessing query chunk 1, reference chunk 14, shape 1, index chunk 3.\nBuilding reference index... [2.7927s]\nBuilding query index... [0.384441s]\nBuilding seed filter... [0.209774s]\nSearching alignments... [1.71503s]\nDeallocating buffers... [0.315847s]\nOpening temporary output file... [0.000527s]\nComputing alignments... [7.59425s]\nDeallocating reference... [0.004523s]\nLoading reference sequences... [4.6e-05s]\nDeallocating buffers... [0.035564s]\nJoining output blocks... [4.22186s]\nDeallocating queries... [0.351923s]\nLoading query sequences... [2.8e-05s]\nClosing the input file... [2.5e-05s]\nClosing the output file... [4.8e-05s]\nClosing the database file... [1.2e-05s]\nDeallocating taxonomy... [4e-06s]\nTotal time = 6233.34s\nReported 4949146 pairwise alignments, 4961038 HSPs.\n3458184 queries aligned.\n' 09/14/2020 02:52:14 PM - humann.utilities - DEBUG: Using software: /usr/bin/cat 09/14/2020 02:52:14 PM - humann.utilities - INFO: Execute command: /usr/bin/cat /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/diamond_m8_xbf316mw 09/14/2020 02:52:15 PM - humann.humann - INFO: TIMESTAMP: Completed translated alignment : 6234 seconds 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments where percent identity is not a number: 0 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments where alignment length is not a number: 0 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments where E-value is not a number: 0 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments not included based on large e-value: 2058 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments not included based on small percent identity: 730082 09/14/2020 02:53:06 PM - humann.utilities - DEBUG: Total alignments not included based on small query coverage: 4468456 09/14/2020 02:53:06 PM - humann.search.blastx_coverage - INFO: Total alignments without coverage information: 0 09/14/2020 02:53:06 PM - humann.search.blastx_coverage - INFO: Total proteins in blastx output: 98938 09/14/2020 02:53:06 PM - humann.search.blastx_coverage - INFO: Total proteins without lengths: 0 09/14/2020 02:53:06 PM - humann.search.blastx_coverage - INFO: Proteins with coverage greater than threshold (50.0): 31209 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments where percent identity is not a number: 0 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments where alignment length is not a number: 0 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments where E-value is not a number: 0 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments not included based on large e-value: 2058 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments not included based on small percent identity: 730082 09/14/2020 02:53:56 PM - humann.utilities - DEBUG: Total alignments not included based on small query coverage: 4468456 09/14/2020 02:53:56 PM - humann.search.translated - DEBUG: Total translated alignments not included based on small subject coverage value: 155048 09/14/2020 02:54:25 PM - humann.humann - INFO: TIMESTAMP: Completed translated alignment post-processing : 130 seconds 09/14/2020 02:54:25 PM - humann.humann - INFO: Total bugs after translated alignment: 50 09/14/2020 02:54:25 PM - humann.humann - INFO: g__Bacteroides.s__Bacteroides_caccae: 274330 hits g__Bacteroides.s__Bacteroides_uniformis: 49963 hits g__Bacteroides.s__Bacteroides_thetaiotaomicron: 21241 hits g__Escherichia.s__Escherichia_coli: 68316 hits g__Bacteroides.s__Bacteroides_cellulosilyticus: 127837 hits g__Bacteroides.s__Bacteroides_fragilis_CAG_47: 53444 hits g__Flavonifractor.s__Flavonifractor_plautii: 19952 hits g__Eisenbergiella.s__Eisenbergiella_tayi: 22801 hits g__Bacteroides.s__Bacteroides_fragilis: 129600 hits g__Roseburia.s__Roseburia_inulinivorans: 7677 hits g__Blautia.s__Ruminococcus_gnavus: 25090 hits g__Erysipelatoclostridium.s__Clostridium_innocuum: 36624 hits g__Bacteroides.s__Bacteroides_vulgatus_CAG_6: 39241 hits g__Bacteroides.s__Bacteroides_uniformis_CAG_3: 24794 hits g__Parabacteroides.s__Parabacteroides_distasonis: 54353 hits g__Faecalibacterium.s__Faecalibacterium_prausnitzii: 62395 hits g__Blautia.s__Blautia_wexlerae: 22922 hits g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234: 5157 hits g__Streptococcus.s__Streptococcus_thermophilus: 6025 hits g__Streptococcus.s__Streptococcus_thermophilus_CAG_236: 2733 hits g__Eubacterium.s__Eubacterium_hallii: 11415 hits g__Bifidobacterium.s__Bifidobacterium_longum: 24012 hits g__Bacteroides.s__Bacteroides_vulgatus: 97178 hits g__Bacteroides.s__Bacteroides_ovatus: 68203 hits g__Eggerthella.s__Eggerthella_lenta: 61835 hits g__Eubacterium.s__Eubacterium_hallii_CAG_12: 7545 hits g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69: 13343 hits g__Alistipes.s__Alistipes_putredinis_CAG_67: 21486 hits g__Lachnoclostridium.s__Clostridium_symbiosum: 3016 hits g__Hungatella.s__Hungatella_hathewayi: 5757 hits g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum: 23221 hits g__Anaerostipes.s__Anaerostipes_hadrus: 3931 hits g__Alistipes.s__Alistipes_finegoldii: 19693 hits g__Gemmiger.s__Gemmiger_formicilis: 12487 hits g__Blautia.s__Blautia_sp_CAG_257: 865 hits g__Sellimonas.s__Sellimonas_intestinalis: 9649 hits g__Lachnoclostridium.s__Clostridium_scindens: 9455 hits g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans: 30308 hits g__Alistipes.s__Alistipes_putredinis: 14038 hits g__Lachnospiraceae_unclassified.s__Eubacterium_rectale: 11599 hits g__Bifidobacterium.s__Bifidobacterium_bifidum: 10010 hits g__Clostridium.s__Clostridium_sp_MSTE9: 10282 hits g__Selenomonas.s__Selenomonas_noxia: 269 hits g__Roseburia.s__Roseburia_hominis: 3059 hits g__Anaerotruncus.s__Anaerotruncus_colihominis: 6393 hits g__Megasphaera.s__Megasphaera_sp_BV3C16_1: 5965 hits g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum: 902 hits g__Roseburia.s__Roseburia_inulinivorans_CAG_15: 669 hits g__Robinsoniella.s__Robinsoniella_sp_RHS: 1383 hits unclassified: 230971 hits 09/14/2020 02:54:25 PM - humann.humann - INFO: Total gene families after translated alignment: 119121 09/14/2020 02:54:25 PM - humann.humann - INFO: Unaligned reads after translated alignment: 67.2907709229 % 09/14/2020 02:54:26 PM - humann.humann - INFO: Computing gene families ... 09/14/2020 02:54:26 PM - humann.quantify.families - DEBUG: Compute gene families 09/14/2020 02:54:27 PM - humann.store - INFO: Total gene families : 119121 g__Bacteroides.s__Bacteroides_caccae : 4036 gene families g__Bacteroides.s__Bacteroides_uniformis : 4149 gene families g__Bacteroides.s__Bacteroides_thetaiotaomicron : 2845 gene families g__Escherichia.s__Escherichia_coli : 12522 gene families g__Bacteroides.s__Bacteroides_cellulosilyticus : 7201 gene families g__Bacteroides.s__Bacteroides_fragilis_CAG_47 : 2729 gene families g__Flavonifractor.s__Flavonifractor_plautii : 2961 gene families g__Eisenbergiella.s__Eisenbergiella_tayi : 3566 gene families g__Bacteroides.s__Bacteroides_fragilis : 7471 gene families g__Roseburia.s__Roseburia_inulinivorans : 840 gene families g__Blautia.s__Ruminococcus_gnavus : 2788 gene families g__Erysipelatoclostridium.s__Clostridium_innocuum : 3386 gene families g__Bacteroides.s__Bacteroides_vulgatus_CAG_6 : 2385 gene families g__Bacteroides.s__Bacteroides_uniformis_CAG_3 : 2397 gene families g__Parabacteroides.s__Parabacteroides_distasonis : 4025 gene families g__Faecalibacterium.s__Faecalibacterium_prausnitzii : 3171 gene families g__Blautia.s__Blautia_wexlerae : 2459 gene families g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234 : 979 gene families g__Streptococcus.s__Streptococcus_thermophilus : 1171 gene families g__Streptococcus.s__Streptococcus_thermophilus_CAG_236 : 699 gene families g__Eubacterium.s__Eubacterium_hallii : 1904 gene families g__Bifidobacterium.s__Bifidobacterium_longum : 2490 gene families g__Bacteroides.s__Bacteroides_vulgatus : 4807 gene families g__Bacteroides.s__Bacteroides_ovatus : 4823 gene families g__Eggerthella.s__Eggerthella_lenta : 2289 gene families g__Eubacterium.s__Eubacterium_hallii_CAG_12 : 1413 gene families g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69 : 1276 gene families g__Alistipes.s__Alistipes_putredinis_CAG_67 : 1550 gene families g__Lachnoclostridium.s__Clostridium_symbiosum : 778 gene families g__Hungatella.s__Hungatella_hathewayi : 1360 gene families g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum : 1776 gene families g__Anaerostipes.s__Anaerostipes_hadrus : 926 gene families g__Alistipes.s__Alistipes_finegoldii : 2006 gene families g__Gemmiger.s__Gemmiger_formicilis : 1623 gene families g__Blautia.s__Blautia_sp_CAG_257 : 265 gene families g__Sellimonas.s__Sellimonas_intestinalis : 1613 gene families g__Lachnoclostridium.s__Clostridium_scindens : 1584 gene families g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans : 2696 gene families g__Alistipes.s__Alistipes_putredinis : 1436 gene families g__Lachnospiraceae_unclassified.s__Eubacterium_rectale : 1945 gene families g__Bifidobacterium.s__Bifidobacterium_bifidum : 1614 gene families g__Clostridium.s__Clostridium_sp_MSTE9 : 1757 gene families g__Selenomonas.s__Selenomonas_noxia : 115 gene families g__Roseburia.s__Roseburia_hominis : 616 gene families g__Anaerotruncus.s__Anaerotruncus_colihominis : 1359 gene families g__Megasphaera.s__Megasphaera_sp_BV3C16_1 : 1004 gene families g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum : 286 gene families g__Roseburia.s__Roseburia_inulinivorans_CAG_15 : 292 gene families g__Robinsoniella.s__Robinsoniella_sp_RHS : 445 gene families unclassified : 31209 gene families 09/14/2020 02:54:43 PM - humann.humann - INFO: TIMESTAMP: Completed computing gene families : 18 seconds 09/14/2020 02:54:44 PM - humann.humann - INFO: Computing pathways abundance and coverage ... 09/14/2020 02:54:44 PM - humann.quantify.modules - DEBUG: Write flat reactions to pathways file for Minpath 09/14/2020 02:54:44 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_caccae 09/14/2020 02:54:45 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_caccae 09/14/2020 02:54:45 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_uniformis 09/14/2020 02:54:47 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_uniformis 09/14/2020 02:54:47 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_thetaiotaomicron 09/14/2020 02:54:48 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_thetaiotaomicron 09/14/2020 02:54:48 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Escherichia.s__Escherichia_coli 09/14/2020 02:54:50 PM - humann.quantify.modules - INFO: Run MinPath on g__Escherichia.s__Escherichia_coli 09/14/2020 02:54:50 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_cellulosilyticus 09/14/2020 02:54:52 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_cellulosilyticus 09/14/2020 02:54:52 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_fragilis_CAG_47 09/14/2020 02:54:53 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_fragilis_CAG_47 09/14/2020 02:54:53 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Flavonifractor.s__Flavonifractor_plautii 09/14/2020 02:54:55 PM - humann.quantify.modules - INFO: Run MinPath on g__Flavonifractor.s__Flavonifractor_plautii 09/14/2020 02:54:55 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Eisenbergiella.s__Eisenbergiella_tayi 09/14/2020 02:54:57 PM - humann.quantify.modules - INFO: Run MinPath on g__Eisenbergiella.s__Eisenbergiella_tayi 09/14/2020 02:54:57 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_fragilis 09/14/2020 02:54:58 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_fragilis 09/14/2020 02:54:58 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Roseburia.s__Roseburia_inulinivorans 09/14/2020 02:55:00 PM - humann.quantify.modules - INFO: Run MinPath on g__Roseburia.s__Roseburia_inulinivorans 09/14/2020 02:55:00 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Blautia.s__Ruminococcus_gnavus 09/14/2020 02:55:01 PM - humann.quantify.modules - INFO: Run MinPath on g__Blautia.s__Ruminococcus_gnavus 09/14/2020 02:55:01 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Erysipelatoclostridium.s__Clostridium_innocuum 09/14/2020 02:55:02 PM - humann.quantify.modules - INFO: Run MinPath on g__Erysipelatoclostridium.s__Clostridium_innocuum 09/14/2020 02:55:02 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_vulgatus_CAG_6 09/14/2020 02:55:04 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_vulgatus_CAG_6 09/14/2020 02:55:04 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_uniformis_CAG_3 09/14/2020 02:55:05 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_uniformis_CAG_3 09/14/2020 02:55:05 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Parabacteroides.s__Parabacteroides_distasonis 09/14/2020 02:55:07 PM - humann.quantify.modules - INFO: Run MinPath on g__Parabacteroides.s__Parabacteroides_distasonis 09/14/2020 02:55:07 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Faecalibacterium.s__Faecalibacterium_prausnitzii 09/14/2020 02:55:08 PM - humann.quantify.modules - INFO: Run MinPath on g__Faecalibacterium.s__Faecalibacterium_prausnitzii 09/14/2020 02:55:08 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Blautia.s__Blautia_wexlerae 09/14/2020 02:55:10 PM - humann.quantify.modules - INFO: Run MinPath on g__Blautia.s__Blautia_wexlerae 09/14/2020 02:55:10 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234 09/14/2020 02:55:11 PM - humann.quantify.modules - INFO: Run MinPath on g__Bifidobacterium.s__Bifidobacterium_bifidum_CAG_234 09/14/2020 02:55:11 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Streptococcus.s__Streptococcus_thermophilus 09/14/2020 02:55:13 PM - humann.quantify.modules - INFO: Run MinPath on g__Streptococcus.s__Streptococcus_thermophilus 09/14/2020 02:55:13 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Streptococcus.s__Streptococcus_thermophilus_CAG_236 09/14/2020 02:55:14 PM - humann.quantify.modules - INFO: Run MinPath on g__Streptococcus.s__Streptococcus_thermophilus_CAG_236 09/14/2020 02:55:14 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Eubacterium.s__Eubacterium_hallii 09/14/2020 02:55:15 PM - humann.quantify.modules - INFO: Run MinPath on g__Eubacterium.s__Eubacterium_hallii 09/14/2020 02:55:16 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bifidobacterium.s__Bifidobacterium_longum 09/14/2020 02:55:17 PM - humann.quantify.modules - INFO: Run MinPath on g__Bifidobacterium.s__Bifidobacterium_longum 09/14/2020 02:55:17 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_vulgatus 09/14/2020 02:55:19 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_vulgatus 09/14/2020 02:55:19 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bacteroides.s__Bacteroides_ovatus 09/14/2020 02:55:21 PM - humann.quantify.modules - INFO: Run MinPath on g__Bacteroides.s__Bacteroides_ovatus 09/14/2020 02:55:21 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Eggerthella.s__Eggerthella_lenta 09/14/2020 02:55:23 PM - humann.quantify.modules - INFO: Run MinPath on g__Eggerthella.s__Eggerthella_lenta 09/14/2020 02:55:23 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Eubacterium.s__Eubacterium_hallii_CAG_12 09/14/2020 02:55:24 PM - humann.quantify.modules - INFO: Run MinPath on g__Eubacterium.s__Eubacterium_hallii_CAG_12 09/14/2020 02:55:24 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69 09/14/2020 02:55:26 PM - humann.quantify.modules - INFO: Run MinPath on g__Bifidobacterium.s__Bifidobacterium_longum_CAG_69 09/14/2020 02:55:26 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Alistipes.s__Alistipes_putredinis_CAG_67 09/14/2020 02:55:27 PM - humann.quantify.modules - INFO: Run MinPath on g__Alistipes.s__Alistipes_putredinis_CAG_67 09/14/2020 02:55:27 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Lachnoclostridium.s__Clostridium_symbiosum 09/14/2020 02:55:29 PM - humann.quantify.modules - INFO: Run MinPath on g__Lachnoclostridium.s__Clostridium_symbiosum 09/14/2020 02:55:29 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Hungatella.s__Hungatella_hathewayi 09/14/2020 02:55:30 PM - humann.quantify.modules - INFO: Run MinPath on g__Hungatella.s__Hungatella_hathewayi 09/14/2020 02:55:30 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum 09/14/2020 02:55:32 PM - humann.quantify.modules - INFO: Run MinPath on g__Bifidobacterium.s__Bifidobacterium_pseudocatenulatum 09/14/2020 02:55:32 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Anaerostipes.s__Anaerostipes_hadrus 09/14/2020 02:55:33 PM - humann.quantify.modules - INFO: Run MinPath on g__Anaerostipes.s__Anaerostipes_hadrus 09/14/2020 02:55:33 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Alistipes.s__Alistipes_finegoldii 09/14/2020 02:55:35 PM - humann.quantify.modules - INFO: Run MinPath on g__Alistipes.s__Alistipes_finegoldii 09/14/2020 02:55:35 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Gemmiger.s__Gemmiger_formicilis 09/14/2020 02:55:36 PM - humann.quantify.modules - INFO: Run MinPath on g__Gemmiger.s__Gemmiger_formicilis 09/14/2020 02:55:36 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Blautia.s__Blautia_sp_CAG_257 09/14/2020 02:55:38 PM - humann.quantify.modules - INFO: Run MinPath on g__Blautia.s__Blautia_sp_CAG_257 09/14/2020 02:55:38 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Sellimonas.s__Sellimonas_intestinalis 09/14/2020 02:55:39 PM - humann.quantify.modules - INFO: Run MinPath on g__Sellimonas.s__Sellimonas_intestinalis 09/14/2020 02:55:39 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Lachnoclostridium.s__Clostridium_scindens 09/14/2020 02:55:40 PM - humann.quantify.modules - INFO: Run MinPath on g__Lachnoclostridium.s__Clostridium_scindens 09/14/2020 02:55:40 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans 09/14/2020 02:55:42 PM - humann.quantify.modules - INFO: Run MinPath on g__Ruthenibacterium.s__Ruthenibacterium_lactatiformans 09/14/2020 02:55:42 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Alistipes.s__Alistipes_putredinis 09/14/2020 02:55:43 PM - humann.quantify.modules - INFO: Run MinPath on g__Alistipes.s__Alistipes_putredinis 09/14/2020 02:55:43 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Lachnospiraceae_unclassified.s__Eubacterium_rectale 09/14/2020 02:55:45 PM - humann.quantify.modules - INFO: Run MinPath on g__Lachnospiraceae_unclassified.s__Eubacterium_rectale 09/14/2020 02:55:45 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Bifidobacterium.s__Bifidobacterium_bifidum 09/14/2020 02:55:46 PM - humann.quantify.modules - INFO: Run MinPath on g__Bifidobacterium.s__Bifidobacterium_bifidum 09/14/2020 02:55:46 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Clostridium.s__Clostridium_sp_MSTE9 09/14/2020 02:55:48 PM - humann.quantify.modules - INFO: Run MinPath on g__Clostridium.s__Clostridium_sp_MSTE9 09/14/2020 02:55:48 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Selenomonas.s__Selenomonas_noxia 09/14/2020 02:55:49 PM - humann.quantify.modules - INFO: Run MinPath on g__Selenomonas.s__Selenomonas_noxia 09/14/2020 02:55:49 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Roseburia.s__Roseburia_hominis 09/14/2020 02:55:50 PM - humann.quantify.modules - INFO: Run MinPath on g__Roseburia.s__Roseburia_hominis 09/14/2020 02:55:50 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Anaerotruncus.s__Anaerotruncus_colihominis 09/14/2020 02:55:52 PM - humann.quantify.modules - INFO: Run MinPath on g__Anaerotruncus.s__Anaerotruncus_colihominis 09/14/2020 02:55:52 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Megasphaera.s__Megasphaera_sp_BV3C16_1 09/14/2020 02:55:53 PM - humann.quantify.modules - INFO: Run MinPath on g__Megasphaera.s__Megasphaera_sp_BV3C16_1 09/14/2020 02:55:53 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum 09/14/2020 02:55:55 PM - humann.quantify.modules - INFO: Run MinPath on g__Erysipelatoclostridium.s__Erysipelatoclostridium_ramosum 09/14/2020 02:55:55 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Roseburia.s__Roseburia_inulinivorans_CAG_15 09/14/2020 02:55:56 PM - humann.quantify.modules - INFO: Run MinPath on g__Roseburia.s__Roseburia_inulinivorans_CAG_15 09/14/2020 02:55:56 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: g__Robinsoniella.s__Robinsoniella_sp_RHS 09/14/2020 02:55:58 PM - humann.quantify.modules - INFO: Run MinPath on g__Robinsoniella.s__Robinsoniella_sp_RHS 09/14/2020 02:55:58 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: unclassified 09/14/2020 02:55:59 PM - humann.quantify.modules - INFO: Run MinPath on unclassified 09/14/2020 02:55:59 PM - humann.quantify.modules - INFO: Compute reaction scores for bug: all 09/14/2020 02:56:01 PM - humann.quantify.modules - INFO: Run MinPath on all 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcalhcwbm -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9msuzopq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2tkj2j3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdoyzk742 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp174pwa_d -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6kmtmj8g -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2dd9n0c5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqmux10y9 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcilg9iht -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnc64n51t -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9qovnmxu -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3s7q5t6p 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpo_4t3x7l -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjykblw8q -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptd9o7gjd -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5lvo__ff 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz0n5ef1t -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2zb_uabe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9krm9x38 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpe0miqrix 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsqou7r_6 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpysb9kxyz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppm3x5cak -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm3t5svp 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpi6fin4nn -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmwddy8qi -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgaq305fr -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpal7np4sy 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp18a5cwx7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8a2lzgan -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5ddl8jyp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpxwq6a_6z 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8f9ziq3y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3_82cdjz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8p_mtk24 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0zi9dpsy 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkmt2eb79 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ccg5of4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp4kfcu72 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6xod6gwy 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3qot7ubj -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp87qoowv7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2e9avma -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppsamm41x 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppzho_t20 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptmnku2kk -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpli21naq1 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp11ttfsld 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiuvj7wms -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw2h4p79b -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz1kvdbbm -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz06miayr 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8eqxdua0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplncw544u -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3l7oia2 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb12kuxex 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpos9hzabl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1dbeazzx -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6hh9tm6i -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1wkwex9y 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu83ozrwo -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpip6evknj -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkslihuxq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu1d6oq74 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp21b0bx0y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6j9cus7z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwa12qu6h -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjq9daray 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpoqrkx8zt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb5yrbxco -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkrw4_mgo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb_qdio23 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqehweozp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3g4w0_ic -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ummbzo0 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3vftmqdt 09/14/2020 02:56:01 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnfj4bfkl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfwzf4h22 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnpwcv610 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf69mdc4 09/14/2020 02:56:02 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp174pwa_d -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6kmtmj8g -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2dd9n0c5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqmux10y9 09/14/2020 02:56:02 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcalhcwbm -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9msuzopq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2tkj2j3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdoyzk742 09/14/2020 02:56:02 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpo_4t3x7l -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjykblw8q -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptd9o7gjd -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5lvo__ff 09/14/2020 02:56:02 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz0n5ef1t -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2zb_uabe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9krm9x38 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpe0miqrix 09/14/2020 02:56:02 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcilg9iht -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnc64n51t -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9qovnmxu -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3s7q5t6p 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpi6fin4nn -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmwddy8qi -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgaq305fr -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpal7np4sy 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8f9ziq3y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3_82cdjz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8p_mtk24 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0zi9dpsy 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp18a5cwx7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8a2lzgan -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5ddl8jyp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpxwq6a_6z 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpo_4t3x7l', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjykblw8q', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptd9o7gjd', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5lvo__ff']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz0n5ef1t', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2zb_uabe', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9krm9x38', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpe0miqrix']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcalhcwbm', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9msuzopq', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2tkj2j3', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdoyzk742']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp174pwa_d', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6kmtmj8g', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2dd9n0c5', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqmux10y9']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcilg9iht', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnc64n51t', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9qovnmxu', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3s7q5t6p']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpi6fin4nn', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmwddy8qi', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgaq305fr', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpal7np4sy']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8f9ziq3y', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3_82cdjz', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8p_mtk24', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0zi9dpsy']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp18a5cwx7', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8a2lzgan', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5ddl8jyp', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpxwq6a_6z']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 45.5 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 42.9 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7946014404297 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7988624572754 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7988624572754 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18346786499023 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18287658691406 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 41.7 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18287658691406 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 20.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.16 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 50.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327369689941406 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181146277316008 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181146277316008 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89fwzcnu -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm776wvm -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp92gogl10 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpipvamt2q 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process user time = 530.17 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpk_em_e_j -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4fv8f7l4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprr5p15pt -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpewjnur6f 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process system time = 25.76 seconds 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181243266949344 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsqou7r_6 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpysb9kxyz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppm3x5cak -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm3t5svp 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppzho_t20 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptmnku2kk -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpli21naq1 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp11ttfsld 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181352380286847 % 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsqou7r_6', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpysb9kxyz', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppm3x5cak', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm3t5svp']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppzho_t20', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptmnku2kk', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpli21naq1', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp11ttfsld']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory RSS = 3.8327713012695312 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3mmuxex7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6_6hd7rv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp43jjs9xg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3bmeby9 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181364503991015 % 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181364503991015 % 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkmt2eb79 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ccg5of4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp4kfcu72 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6xod6gwy 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181400875103516 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Process memory percent = 1.2181400875103516 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjarasagt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsyozord -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp377b516d -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdrngz1vj 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7947998046875 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkmt2eb79', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ccg5of4', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp4kfcu72', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6xod6gwy']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp610lcley -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpix6zhk6p -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt0u5qle4 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmyufmu28 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7953910827637 GB 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18329620361328 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3qot7ubj -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp87qoowv7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2e9avma -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppsamm41x 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn46pcxy3 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmqjqw6jl -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp13u4k2o5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfahxnn0h 09/14/2020 02:56:03 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.18341445922852 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiuvj7wms -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw2h4p79b -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz1kvdbbm -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz06miayr 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpos9hzabl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1dbeazzx -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6hh9tm6i -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1wkwex9y 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyg518byg -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj3ea7_67 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplle8_eoo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw5qg_4_3 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3qot7ubj', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp87qoowv7', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2e9avma', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppsamm41x']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfa40ojzq -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2auo2do9 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5at0qndx -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp396xu8iz 09/14/2020 02:56:03 PM - humann.utilities - INFO: Available memory = 303.7846488952637 GB 09/14/2020 02:56:03 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu83ozrwo -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpip6evknj -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkslihuxq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu1d6oq74 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8eqxdua0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplncw544u -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3l7oia2 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb12kuxex 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiuvj7wms', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw2h4p79b', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz1kvdbbm', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz06miayr']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpos9hzabl', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1dbeazzx', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6hh9tm6i', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1wkwex9y']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 31.0 % 09/14/2020 02:56:03 PM - humann.utilities - INFO: Free memory = 220.17191696166992 GB 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp21b0bx0y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6j9cus7z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwa12qu6h -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjq9daray 09/14/2020 02:56:03 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu83ozrwo', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpip6evknj', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkslihuxq', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu1d6oq74']' returned non-zero exit status 1. 09/14/2020 02:56:03 PM - humann.utilities - INFO: CPU percent = 28.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8eqxdua0', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplncw544u', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3l7oia2', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb12kuxex']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.5 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp21b0bx0y', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6j9cus7z', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwa12qu6h', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjq9daray']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.78947830200195 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.17468643188477 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 37.5 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.79610443115234 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.79610443115234 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.79610443115234 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.5 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.79610443115234 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1822738647461 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.7955131530762 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1822738647461 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1822738647461 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1822738647461 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 26.7 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1822738647461 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 28.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.21 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 42.9 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.21 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 791.8 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.22 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.2181570606961853 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.22 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218158273066602 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.23 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.23 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf2pfmzf7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9_cpf8bn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvn5dgbe9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpopvlgq2_ 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.23 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.23 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.23 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgjttuol4 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf9o4ttv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5t8nkf4_ -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpctlx03i6 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218161910177852 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnfj4bfkl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfwzf4h22 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnpwcv610 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf69mdc4 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqehweozp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3g4w0_ic -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ummbzo0 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3vftmqdt 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 26.42 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89fwzcnu -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm776wvm -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp92gogl10 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpipvamt2q 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnfj4bfkl', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfwzf4h22', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnpwcv610', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf69mdc4']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqehweozp', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3g4w0_ic', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ummbzo0', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3vftmqdt']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218166759659519 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89fwzcnu', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm776wvm', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp92gogl10', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpipvamt2q']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf97e3pq8 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpphs7fxo0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj0__r2mj -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ev1o44o 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.832904815673828 GB 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8329086303710938 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218170396770769 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpoqrkx8zt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb5yrbxco -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkrw4_mgo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb_qdio23 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcwshonp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp55sdrv_e -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb7t6v8y9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcoepjzx0 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpk_em_e_j -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4fv8f7l4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprr5p15pt -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpewjnur6f 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218174033882019 % 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.8054084777832 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218174033882019 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.8049201965332 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218174033882019 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218174033882019 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpoqrkx8zt', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb5yrbxco', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkrw4_mgo', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb_qdio23']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.8054084777832 GB 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1910514831543 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpk_em_e_j', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4fv8f7l4', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprr5p15pt', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpewjnur6f']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcrhjvjt1 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpythoq9j7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcd6y1vhe -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiq9xn68t 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1910514831543 GB 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.1910514831543 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx32vaufc -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu4566631 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppt0ow9fq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqjaptka3 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeknb4uy2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvjj1x86h -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpit7ol51q -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpypagl85f 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3mmuxex7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6_6hd7rv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp43jjs9xg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3bmeby9 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp610lcley -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpix6zhk6p -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt0u5qle4 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmyufmu28 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjarasagt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsyozord -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp377b516d -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdrngz1vj 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz2hbu_ih -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpy0pwcazw -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu_sbxhpg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmps1wzdelb 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6crxo_jp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf6tx8afu -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiwlow1d3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplp61sbd9 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 26.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 27.2 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn46pcxy3 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmqjqw6jl -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp13u4k2o5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfahxnn0h 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.80905532836914 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3mmuxex7', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6_6hd7rv', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp43jjs9xg', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3bmeby9']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyg518byg -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj3ea7_67 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplle8_eoo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw5qg_4_3 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp610lcley', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpix6zhk6p', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt0u5qle4', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmyufmu28']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjarasagt', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsyozord', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp377b516d', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdrngz1vj']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.80856704711914 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfa40ojzq -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2auo2do9 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5at0qndx -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp396xu8iz 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 22.6 % 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgjttuol4 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf9o4ttv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5t8nkf4_ -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpctlx03i6 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf2pfmzf7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9_cpf8bn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvn5dgbe9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpopvlgq2_ 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.19329833984375 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn46pcxy3', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmqjqw6jl', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp13u4k2o5', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfahxnn0h']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyg518byg', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj3ea7_67', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplle8_eoo', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw5qg_4_3']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.19329833984375 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfa40ojzq', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2auo2do9', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5at0qndx', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp396xu8iz']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf2pfmzf7', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9_cpf8bn', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvn5dgbe9', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpopvlgq2_']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgjttuol4', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf9o4ttv', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5t8nkf4_', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpctlx03i6']' returned non-zero exit status 1. 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 21.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Available memory = 303.824649810791 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Free memory = 220.20696258544922 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 26.1 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 40.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.28 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.28 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.28 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.29 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.29 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218189794697436 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218189794697436 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.3 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.218189794697436 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.3 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 3376.2 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.3 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.3 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7y3a6v30 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz88dxgst -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpc_k834y6 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb1ivbagh 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvfgj4at9 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpuvzgxbkn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyietvmrv -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfvo046wy 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.31 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.31 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.31 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process user time = 530.31 seconds 09/14/2020 02:56:04 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp29q0ttn2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7baq3d7a -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwlso2v02 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2l5vkyc9 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory percent = 1.2181922194382695 % 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:04 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process system time = 27.27 seconds 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.218198281290353 % 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf97e3pq8 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpphs7fxo0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj0__r2mj -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ev1o44o 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330078125 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsy4prbq0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjo4yzdfo -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_7axf967 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsbnrqz2f 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf97e3pq8', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpphs7fxo0', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj0__r2mj', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ev1o44o']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330116271972656 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2181994936607698 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330116271972656 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330116271972656 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory RSS = 3.8330154418945312 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2181994936607698 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpa17jadiy -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb9dzwt0i -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp57nvbmir -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4tnmv1ek 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcwshonp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp55sdrv_e -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb7t6v8y9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcoepjzx0 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2181994936607698 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2181994936607698 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcwshonp', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp55sdrv_e', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb7t6v8y9', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcoepjzx0']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcrhjvjt1 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpythoq9j7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcd6y1vhe -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiq9xn68t 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2182007060311864 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprh36_3xk -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9q9yxx4z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppqnm5mst -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpimy27lqh 09/14/2020 02:56:05 PM - humann.utilities - INFO: Available memory = 303.81486892700195 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2182031307720198 % 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2182043431424365 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Process memory percent = 1.2182043431424365 % 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcrhjvjt1', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpythoq9j7', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcd6y1vhe', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiq9xn68t']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmehn1xhb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqef1a40l -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ujwhvew -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprn36d_yi 09/14/2020 02:56:05 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Free memory = 220.19618225097656 GB 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeknb4uy2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvjj1x86h -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpit7ol51q -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpypagl85f 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6lehsgjs -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9yew1sge -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnldfobqp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89j5n29z 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdm9u6500 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeo3t_co7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ti5vjw5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppe9yvrcw 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:05 PM - humann.utilities - INFO: Available memory = 303.8135452270508 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx32vaufc -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu4566631 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppt0ow9fq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqjaptka3 09/14/2020 02:56:05 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfxdgchzb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4b2w5zt0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt9rcjyx8 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcpr1rgp 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeknb4uy2', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvjj1x86h', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpit7ol51q', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpypagl85f']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl3k16esv -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp_dd_mbe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4m_1jywz -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1vahgcr6 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz2hbu_ih -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpy0pwcazw -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu_sbxhpg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmps1wzdelb 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl0tzgug2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl2dzllms -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_wegvpf3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbx7ehjoj 09/14/2020 02:56:05 PM - humann.utilities - INFO: Free memory = 220.1947479248047 GB 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6crxo_jp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf6tx8afu -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiwlow1d3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplp61sbd9 09/14/2020 02:56:05 PM - humann.utilities - INFO: Available memory = 303.8027648925781 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_maffelz -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsfvlinq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbw4wgfah -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp00ajeugw 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx32vaufc', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu4566631', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppt0ow9fq', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqjaptka3']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7y3a6v30 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz88dxgst -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpc_k834y6 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb1ivbagh 09/14/2020 02:56:05 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:05 PM - humann.utilities - INFO: CPU percent = 23.4 % 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvfgj4at9 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpuvzgxbkn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyietvmrv -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfvo046wy 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz2hbu_ih', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpy0pwcazw', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu_sbxhpg', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmps1wzdelb']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp29q0ttn2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7baq3d7a -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwlso2v02 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2l5vkyc9 09/14/2020 02:56:05 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6crxo_jp', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf6tx8afu', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiwlow1d3', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplp61sbd9']' returned non-zero exit status 1. 09/14/2020 02:56:05 PM - humann.utilities - INFO: Free memory = 220.18375396728516 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsy4prbq0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjo4yzdfo -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_7axf967 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsbnrqz2f 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.81023025512695 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7y3a6v30', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz88dxgst', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpc_k834y6', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb1ivbagh']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvfgj4at9', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpuvzgxbkn', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyietvmrv', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfvo046wy']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp29q0ttn2', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7baq3d7a', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwlso2v02', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2l5vkyc9']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 24.9 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsy4prbq0', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjo4yzdfo', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_7axf967', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsbnrqz2f']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.1904640197754 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8015251159668 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8090476989746 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 26.7 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8090476989746 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18097305297852 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.80845642089844 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.1895751953125 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.80845642089844 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18849563598633 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.80845642089844 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.80845642089844 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18849563598633 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18790435791016 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18790435791016 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 22.2 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.18790435791016 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 33.3 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 20.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 50.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.36 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 40.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 25.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.36 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.36 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182128297353534 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - DEBUG: Using python module : /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182128297353534 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Execute command: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpr52m6p5b -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ju4uqi2 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpv6exou_7 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjol6y4vz 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182128297353534 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.37 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.38 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprh36_3xk -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9q9yxx4z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppqnm5mst -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpimy27lqh 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpa17jadiy -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb9dzwt0i -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp57nvbmir -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4tnmv1ek 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 1474.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182140421057701 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprh36_3xk', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9q9yxx4z', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppqnm5mst', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpimy27lqh']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpa17jadiy', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb9dzwt0i', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp57nvbmir', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4tnmv1ek']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833080291748047 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8225440979004 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.20132064819336 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmehn1xhb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqef1a40l -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ujwhvew -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprn36d_yi 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8225440979004 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.20132064819336 GB 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmehn1xhb', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqef1a40l', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ujwhvew', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprn36d_yi']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 22.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 22.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.82901763916016 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.2080078125 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 22.2 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.39 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.49 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833087921142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.39 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.49 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.39 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.49 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833087921142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833087921142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6lehsgjs -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9yew1sge -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnldfobqp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89j5n29z 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6lehsgjs', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9yew1sge', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnldfobqp', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89j5n29z']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.84776306152344 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.22594833374023 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 17.7 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.4 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.49 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.833087921142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182152544761868 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfxdgchzb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4b2w5zt0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt9rcjyx8 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcpr1rgp 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfxdgchzb', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4b2w5zt0', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt9rcjyx8', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcpr1rgp']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8516960144043 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.22951889038086 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 15.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.4 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.49 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.8330917358398438 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182164668466036 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdm9u6500 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeo3t_co7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ti5vjw5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppe9yvrcw 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdm9u6500', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeo3t_co7', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ti5vjw5', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppe9yvrcw']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8568649291992 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.23457717895508 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 14.3 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.4 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.5 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.8330917358398438 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182164668466036 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl3k16esv -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp_dd_mbe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4m_1jywz -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1vahgcr6 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl3k16esv', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp_dd_mbe', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4m_1jywz', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1vahgcr6']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.8608283996582 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.2383270263672 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 10.5 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.4 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.5 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.8330955505371094 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182176792170203 % 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl0tzgug2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl2dzllms -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_wegvpf3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbx7ehjoj 09/14/2020 02:56:06 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl0tzgug2', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl2dzllms', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_wegvpf3', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbx7ehjoj']' returned non-zero exit status 1. 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Available memory = 303.86451721191406 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Free memory = 220.24181747436523 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: CPU percent = 7.7 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:06 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process user time = 530.4 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process system time = 28.5 seconds 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory RSS = 3.8330955505371094 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:06 PM - humann.utilities - INFO: Process memory percent = 1.2182176792170203 % 09/14/2020 02:56:07 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_maffelz -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsfvlinq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbw4wgfah -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp00ajeugw 09/14/2020 02:56:07 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_maffelz', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsfvlinq', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbw4wgfah', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp00ajeugw']' returned non-zero exit status 1. 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Available memory = 303.8700637817383 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Free memory = 220.24736404418945 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: CPU percent = 5.0 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process user time = 530.41 seconds 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process system time = 28.5 seconds 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory RSS = 3.8330955505371094 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory percent = 1.2182176792170203 % 09/14/2020 02:56:07 PM - humann.utilities - CRITICAL: Error executing: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpr52m6p5b -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ju4uqi2 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpv6exou_7 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjol6y4vz 09/14/2020 02:56:07 PM - humann.utilities - CRITICAL: TRACEBACK: Traceback (most recent call last): File "/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/utilities.py", line 754, in execute_command p = subprocess.check_call(cmd, stdin=stdin, stdout=stdout, stderr=stderr) File "/ctmr/anaconda/anaconda3/lib/python3.7/subprocess.py", line 347, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['/ctmr/anaconda/anaconda3/bin/python', '/home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py', '-any', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpr52m6p5b', '-map', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa', '-report', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ju4uqi2', '-details', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpv6exou_7', '-mps', '/home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjol6y4vz']' returned non-zero exit status 1. 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total memory = 314.64783477783203 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Available memory = 303.8771438598633 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Free memory = 220.2540168762207 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Percent memory used = 3.4 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: CPU percent = 2.5 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total cores count = 40 09/14/2020 02:56:07 PM - humann.utilities - INFO: Total disk = 39.309783935546875 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Used disk = 13.028907775878906 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Percent disk used = 34.6 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process create time = 2020-09-14 12:49:59 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process user time = 530.41 seconds 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process system time = 28.5 seconds 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process CPU percent = 0.0 % 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory RSS = 3.8330955505371094 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory VMS = 5.352619171142578 GB 09/14/2020 02:56:07 PM - humann.utilities - INFO: Process memory percent = 1.2182176792170203 % 09/14/2020 02:56:07 PM - humann.utilities - CRITICAL: CRITICAL ERROR: Unable to process all thread commands. Error message returned from command for thread task 6: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpo_4t3x7l -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjykblw8q -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptd9o7gjd -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5lvo__ff Error message returned from command for thread task 2: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcalhcwbm -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9msuzopq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2tkj2j3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdoyzk742 Error message returned from command for thread task 7: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz0n5ef1t -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2zb_uabe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9krm9x38 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpe0miqrix Error message returned from command for thread task 0: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp174pwa_d -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6kmtmj8g -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2dd9n0c5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqmux10y9 Error message returned from command for thread task 5: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcilg9iht -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnc64n51t -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9qovnmxu -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3s7q5t6p Error message returned from command for thread task 10: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpi6fin4nn -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmwddy8qi -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgaq305fr -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpal7np4sy Error message returned from command for thread task 11: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp18a5cwx7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8a2lzgan -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5ddl8jyp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpxwq6a_6z Error message returned from command for thread task 1: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8f9ziq3y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3_82cdjz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8p_mtk24 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0zi9dpsy Error message returned from command for thread task 9: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppzho_t20 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmptmnku2kk -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpli21naq1 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp11ttfsld Error message returned from command for thread task 8: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsqou7r_6 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpysb9kxyz -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppm3x5cak -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm3t5svp Error message returned from command for thread task 13: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkmt2eb79 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ccg5of4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp4kfcu72 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6xod6gwy Error message returned from command for thread task 4: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3qot7ubj -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp87qoowv7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx2e9avma -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppsamm41x Error message returned from command for thread task 16: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiuvj7wms -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw2h4p79b -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz1kvdbbm -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz06miayr Error message returned from command for thread task 17: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpos9hzabl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1dbeazzx -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6hh9tm6i -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1wkwex9y Error message returned from command for thread task 12: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp8eqxdua0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplncw544u -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3l7oia2 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb12kuxex Error message returned from command for thread task 19: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu83ozrwo -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpip6evknj -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkslihuxq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu1d6oq74 Error message returned from command for thread task 18: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp21b0bx0y -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6j9cus7z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwa12qu6h -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjq9daray Error message returned from command for thread task 15: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnfj4bfkl -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfwzf4h22 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnpwcv610 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf69mdc4 Error message returned from command for thread task 20: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89fwzcnu -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzm776wvm -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp92gogl10 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpipvamt2q Error message returned from command for thread task 14: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqehweozp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3g4w0_ic -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ummbzo0 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3vftmqdt Error message returned from command for thread task 3: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpoqrkx8zt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb5yrbxco -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpkrw4_mgo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb_qdio23 Error message returned from command for thread task 21: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpk_em_e_j -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4fv8f7l4 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprr5p15pt -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpewjnur6f Error message returned from command for thread task 22: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp3mmuxex7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6_6hd7rv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp43jjs9xg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn3bmeby9 Error message returned from command for thread task 24: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp610lcley -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpix6zhk6p -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt0u5qle4 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmyufmu28 Error message returned from command for thread task 23: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjarasagt -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsyozord -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp377b516d -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdrngz1vj Error message returned from command for thread task 25: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpn46pcxy3 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmqjqw6jl -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp13u4k2o5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfahxnn0h Error message returned from command for thread task 26: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyg518byg -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj3ea7_67 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplle8_eoo -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw5qg_4_3 Error message returned from command for thread task 27: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfa40ojzq -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2auo2do9 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5at0qndx -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp396xu8iz Error message returned from command for thread task 28: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf2pfmzf7 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9_cpf8bn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvn5dgbe9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpopvlgq2_ Error message returned from command for thread task 29: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpgjttuol4 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpaf9o4ttv -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp5t8nkf4_ -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpctlx03i6 Error message returned from command for thread task 30: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf97e3pq8 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpphs7fxo0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpj0__r2mj -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ev1o44o Error message returned from command for thread task 31: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcwshonp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp55sdrv_e -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb7t6v8y9 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcoepjzx0 Error message returned from command for thread task 32: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcrhjvjt1 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpythoq9j7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpcd6y1vhe -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiq9xn68t Error message returned from command for thread task 34: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeknb4uy2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvjj1x86h -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpit7ol51q -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpypagl85f Error message returned from command for thread task 33: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpx32vaufc -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu4566631 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppt0ow9fq -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqjaptka3 Error message returned from command for thread task 36: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6crxo_jp -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpf6tx8afu -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpiwlow1d3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmplp61sbd9 Error message returned from command for thread task 35: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz2hbu_ih -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpy0pwcazw -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpu_sbxhpg -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmps1wzdelb Error message returned from command for thread task 37: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7y3a6v30 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpz88dxgst -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpc_k834y6 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb1ivbagh Error message returned from command for thread task 38: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpvfgj4at9 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpuvzgxbkn -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpyietvmrv -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfvo046wy Error message returned from command for thread task 39: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp29q0ttn2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7baq3d7a -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpwlso2v02 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp2l5vkyc9 Error message returned from command for thread task 40: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsy4prbq0 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjo4yzdfo -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_7axf967 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpsbnrqz2f Error message returned from command for thread task 41: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpa17jadiy -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpb9dzwt0i -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp57nvbmir -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4tnmv1ek Error message returned from command for thread task 42: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprh36_3xk -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9q9yxx4z -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppqnm5mst -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpimy27lqh Error message returned from command for thread task 43: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpmehn1xhb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpqef1a40l -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6ujwhvew -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmprn36d_yi Error message returned from command for thread task 44: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp6lehsgjs -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp9yew1sge -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnldfobqp -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp89j5n29z Error message returned from command for thread task 46: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpfxdgchzb -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4b2w5zt0 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpt9rcjyx8 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpzcpr1rgp Error message returned from command for thread task 45: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpdm9u6500 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpeo3t_co7 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp7ti5vjw5 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmppe9yvrcw Error message returned from command for thread task 47: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl3k16esv -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpp_dd_mbe -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp4m_1jywz -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp1vahgcr6 Error message returned from command for thread task 48: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl0tzgug2 -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpl2dzllms -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_wegvpf3 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbx7ehjoj Error message returned from command for thread task 49: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp_maffelz -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpnsfvlinq -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpbw4wgfah -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp00ajeugw Error message returned from command for thread task 50: /ctmr/anaconda/anaconda3/bin/python /home/stefanie.prast/.local/lib/python3.7/site-packages/humann/quantify/MinPath12hmp.py -any /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpr52m6p5b -map /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpw1ms9gxa -report /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmp0ju4uqi2 -details /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpv6exou_7 -mps /home/stefanie.prast/projects/ep/humann3/PA.02humann3/PA.02_humann_temp/tmptiht92rj/tmpjol6y4vz