I am running Metaphlan2 (2.96.1) with the mpa_v296_CHOCOPhlAn database. When I analyzed the subsampled data (
https://bitbucket.org/biobakery/biobakery/raw/tip/demos/biobakery_demos/data/metaphlan2/input/SRS014476-Supragingival_plaque.fasta.gz) provided in the tutorial with my installed software, I found the result is different from what given in the tutorial. Here I’m attaching my output file.
Please tell me why I am getting discrepancies in my result?
Link to tutorial output file: