Long reads (nanopore)

Hi

Everywhere I read it seems that bioBakery tools are specifically for illumina and shotgun sequencing, would any of thee work with whole 16S reads (V1-V9, ca. 1500 bases) generated for example with nanopore platforms?

thanks
Martin

Hi @mawa86
Unfortunally, none of them will work with 16S sequencing data.

hi
will they work? which ones specifically? and why unfortunately if I may ask?

Hi @mawa86
Sorry, my mistake, I wanted to say none of them will work.

thanks for the clarification @aitor.blancomiguez !

Martin