Investigation of bacteria in RNA-Seq samples


I’m interested in sepsis and would like to investigate the expression of virulence factors in RNA-Seq samples, but most RNA-seq samples contain only RNA with poly-A tails, right?

where can I find public databases, containing meta genomes (bacteria and host sides) of septic samples?

many thanks, Fabiano

MGnify is a great database for finding datasets that match particular metadata criteria. Perhaps you could find what you need there?