# IBDMDB HMP2 host transcriptomics data

**URL:** <https://forum.biobakery.org/t/ibdmdb-hmp2-host-transcriptomics-data/7691>\
**Category:** IBDMDB\
**Created:** [December 24, 2024, 1:40am UTC](https://forum.biobakery.org/t/ibdmdb-hmp2-host-transcriptomics-data/7691 "2024-12-24T01:40:55Z")\
**Posts on this page:** 1\
**Page:** 1

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**Author:** ![kestlermai](https://yyz1.discourse-cdn.com/flex027/user_avatar/forum.biobakery.org/kestlermai/32/3117_2.png) [@kestlermai](https://forum.biobakery.org/u/kestlermai)\
**Post date:** [December 24, 2024, 1:40am UTC](https://forum.biobakery.org/t/ibdmdb-hmp2-host-transcriptomics-data/7691/1 "2024-12-24T01:40:55Z")

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Dear Biobakery folks, I am currently analyzing host transcriptome data from the IBDMDB project, but I could not find detailed introductions to gene annotation files in either the IBDMDB project protocols page ([https://ibdmdb.org/static/media/uploads/Clinical%20Protocols/Data%20Generation%20Protocols/Host\_Transcriptomics\_HMP2\_protocol.pdf](https://ibdmdb.org/static/media/uploads/Clinical%20Protocols/Data%20Generation%20Protocols/Host_Transcriptomics_HMP2_protocol.pdf)) or the related log file ([https://g-227ca.190ebd.75bc.data.globus.org/ibdmdb/metadata/anadama\_run.log.gz](https://g-227ca.190ebd.75bc.data.globus.org/ibdmdb/metadata/anadama_run.log.gz)). Therefore, I would like to inquire about which version of gene annotation was used for this data.