# Error in Format Data for LEfSe

**URL:** <https://forum.biobakery.org/t/error-in-format-data-for-lefse/5933>\
**Category:** LEfSe\
**Created:** [September 15, 2023, 10:53am UTC](https://forum.biobakery.org/t/error-in-format-data-for-lefse/5933 "2023-09-15T10:53:21Z")\
**Posts on this page:** 1\
**Showing post:** 9

<div class="post-metadata">

**Author:** ![blair.merrick](https://avatars.discourse-cdn.com/v4/letter/b/e19b73/32.png) [@blair.merrick](https://forum.biobakery.org/u/blair.merrick)\
**Post date:** [October 6, 2023, 12:30pm UTC](https://forum.biobakery.org/t/error-in-format-data-for-lefse/5933/9 "2023-10-06T12:30:00Z")

</div>

Managed to get it to run by downloading an updated “lefse\_format\_input.py” file from: [https://github.com/SegataLab/lefse/tree/master/lefse](https://github.com/SegataLab/lefse/tree/master/lefse)

---

_[View the full topic](https://forum.biobakery.org/t/error-in-format-data-for-lefse/5933)._
