|
Reference values for a categorical fixed effect variable
|
|
17
|
176
|
December 2, 2020
|
|
Run WGCNA output with Maaslin
|
|
3
|
34
|
December 1, 2020
|
|
Output All results N.not.0=0
|
|
5
|
190
|
December 1, 2020
|
|
LEfSe analyses in the Galaxy
|
|
1
|
94
|
November 30, 2020
|
|
LefSe error message on galaxy
|
|
1
|
73
|
November 29, 2020
|
|
Number of features in the original database leads to different number of significantly discriminative features in LEfSe?
|
|
1
|
74
|
November 29, 2020
|
|
Maaslin2 outputs empty plots
|
|
2
|
77
|
November 25, 2020
|
|
Coefficient value greater than 1
|
|
4
|
160
|
November 23, 2020
|
|
Filtering MaAsLin results based on coefficients
|
|
5
|
103
|
November 21, 2020
|
|
Dataset not run by LefSe in galaxy at second step. b) LDA effect size (LefSe)
|
|
0
|
66
|
November 20, 2020
|
|
Running MetaPhlAn3 output with MaAsLin2 and Lefse: Highly different result
|
|
4
|
168
|
November 19, 2020
|
|
LEfSe analysis, plotting negative LDA score (log10)
|
|
1
|
83
|
November 18, 2020
|
|
Lefse without any subclass- still valid?
|
|
5
|
443
|
November 18, 2020
|
|
Maaslin2 output model
|
|
2
|
94
|
November 18, 2020
|
|
Comprehensive names/aliases of taxonomy units in the gut microbiome
|
|
1
|
54
|
November 17, 2020
|
|
Documentation of options for analysis_method/transform/normalization
|
|
1
|
101
|
November 14, 2020
|
|
Is Lefse analysis appropriate for metabolomic data of a envorinmental samples?
|
|
2
|
50
|
November 11, 2020
|
|
Undefined columns error in MaAsLin2
|
|
5
|
112
|
November 11, 2020
|
|
Different result from lefse at genus level when used metaphlan output profile upto genus and species level
|
|
2
|
113
|
November 10, 2020
|
|
Lefse on small sample size
|
|
4
|
258
|
November 9, 2020
|
|
Error while trying to process data to LEfSe
|
|
3
|
86
|
November 6, 2020
|
|
MaAsLin2 transform="AST" error
|
|
1
|
90
|
November 6, 2020
|
|
MaAsLin for metabolites analysis
|
|
1
|
69
|
October 30, 2020
|
|
Confounding factors
|
|
14
|
959
|
October 30, 2020
|
|
Conda version error: Unable to find the hierarchy module
|
|
2
|
101
|
October 28, 2020
|
|
Does lefse takes care of rare taxa or feature?
|
|
1
|
85
|
October 27, 2020
|
|
Is MaAsLin appropriate for a crossover study design?
|
|
2
|
103
|
October 14, 2020
|
|
Label for unclassified sequences
|
|
2
|
69
|
October 12, 2020
|
|
Should the cailbration data contain raw, unprocessed counts?
|
|
3
|
70
|
October 9, 2020
|
|
Lefse analysis in R
|
|
4
|
811
|
October 9, 2020
|